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The map label for this gene is 108562697

Identifier: 108562697

GI number: 108562697

Start: 277500

End: 278153

Strand: Direct

Name: 108562697

Synonym: HPAG1_0272

Alternate gene names: NA

Gene position: 277500-278153 (Clockwise)

Preceding gene: 108562696

Following gene: 108562698

Centisome position: 17.38

GC content: 41.9

Gene sequence:

>654_bases
TTGAGCTTAAAATTTTTCAGGAAAAATATCGTTTTAAAGGTTGTCCCTCGTTTGGCGTTTGGAGTCCTTTGGTTGTTGCA
TAAAACTTGTAAAAACCGCTATTTTTTAGCTCAAAATTTAAAAGAAAAACCCTTTATTGTAAGCTGTTGGCATGGGGAGC
TTGGCATGATTGGGTTTGCGTATTTAAGGCTTGAAAAACCTTCTGTTTATGTGATCGCAAGCCAGCATTTTGATGGCTCT
ATTGCGGCGGGTTTGTTTGAAAGCTTTGGTTTTAAAAACATTAGAGGTTCTAGCAAAAAAGGGGGGGTTAAGGTTTTGAT
AGAGGGGCTTAAACGCTTGAAAGAAGGTTGCGATGTCGCTATCACTCCTGATGGCCCTAAAGGCCCACGACACAGCATAG
CGGATGGGGTGATCGCTTTAGCTCAAAAATCAGGCGTGGGGATTAGCGCTTGTCGGGTGGTTTGTAAAAACGCATGGCGG
TTGAACACTTGGGATCAATTTGAAATCCCTAAGCCTTTTAGCGAAGTGTATTATTACATGCTAGAATCGGTGATCATCCC
TAAAGAATGGGAGCTTTCAAAGGCTAAAGAATATTTAAAGACGCGCATGGATTCTGTTGGGTTTGAAGAACCTCAAAGGG
GTTTGGGTGCTTAA

Upstream 100 bases:

>100_bases
TAAAAGTGGAGATTATTTCTCATTCCAAAGGGCGCTTGATAGCGGCCATTAAAGGCAACTAATCAAAATAACCAATGAAG
AGTGGGTTTAAAGGCGAGAA

Downstream 100 bases:

>100_bases
AGGGTTAAAAAAAGCGTTCAAAGAGAGGTTTTGCTCTCAAGTGTATATCTCTTTTAATGTGGATCACAATCTTTTATCCA
CTCAAGTCATAAGGATCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSLKFFRKNIVLKVVPRLAFGVLWLLHKTCKNRYFLAQNLKEKPFIVSCWHGELGMIGFAYLRLEKPSVYVIASQHFDGS
IAAGLFESFGFKNIRGSSKKGGVKVLIEGLKRLKEGCDVAITPDGPKGPRHSIADGVIALAQKSGVGISACRVVCKNAWR
LNTWDQFEIPKPFSEVYYYMLESVIIPKEWELSKAKEYLKTRMDSVGFEEPQRGLGA

Sequences:

>Translated_217_residues
MSLKFFRKNIVLKVVPRLAFGVLWLLHKTCKNRYFLAQNLKEKPFIVSCWHGELGMIGFAYLRLEKPSVYVIASQHFDGS
IAAGLFESFGFKNIRGSSKKGGVKVLIEGLKRLKEGCDVAITPDGPKGPRHSIADGVIALAQKSGVGISACRVVCKNAWR
LNTWDQFEIPKPFSEVYYYMLESVIIPKEWELSKAKEYLKTRMDSVGFEEPQRGLGA
>Mature_216_residues
SLKFFRKNIVLKVVPRLAFGVLWLLHKTCKNRYFLAQNLKEKPFIVSCWHGELGMIGFAYLRLEKPSVYVIASQHFDGSI
AAGLFESFGFKNIRGSSKKGGVKVLIEGLKRLKEGCDVAITPDGPKGPRHSIADGVIALAQKSGVGISACRVVCKNAWRL
NTWDQFEIPKPFSEVYYYMLESVIIPKEWELSKAKEYLKTRMDSVGFEEPQRGLGA

Specific function: Unknown

COG id: COG2121

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.pylori HP0270 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007172
- ProDom:   PD032436 [H]

Pfam domain/function: PF04028 DUF374 [H]

EC number: NA

Molecular weight: Translated: 24419; Mature: 24288

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKFFRKNIVLKVVPRLAFGVLWLLHKTCKNRYFLAQNLKEKPFIVSCWHGELGMIGFA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCCCCEEEECCCCHHHHEEE
YLRLEKPSVYVIASQHFDGSIAAGLFESFGFKNIRGSSKKGGVKVLIEGLKRLKEGCDVA
EEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
ITPDGPKGPRHSIADGVIALAQKSGVGISACRVVCKNAWRLNTWDQFEIPKPFSEVYYYM
ECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
LESVIIPKEWELSKAKEYLKTRMDSVGFEEPQRGLGA
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SLKFFRKNIVLKVVPRLAFGVLWLLHKTCKNRYFLAQNLKEKPFIVSCWHGELGMIGFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCCCCEEEECCCCHHHHEEE
YLRLEKPSVYVIASQHFDGSIAAGLFESFGFKNIRGSSKKGGVKVLIEGLKRLKEGCDVA
EEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
ITPDGPKGPRHSIADGVIALAQKSGVGISACRVVCKNAWRLNTWDQFEIPKPFSEVYYYM
ECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
LESVIIPKEWELSKAKEYLKTRMDSVGFEEPQRGLGA
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]