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The map label for this gene is 103488314

Identifier: 103488314

GI number: 103488314

Start: 2990758

End: 2991333

Strand: Reverse

Name: 103488314

Synonym: Sala_2837

Alternate gene names: NA

Gene position: 2991333-2990758 (Counterclockwise)

Preceding gene: 103488315

Following gene: 103488313

Centisome position: 89.42

GC content: 61.46

Gene sequence:

>576_bases
ATGGAAATCCGCGTCTCTGGCCACCAGATCGAAACCGGCGAAGCGCTGCAGGCGCATGTTGCGGACCGGATGAACGCGAT
TGCCGACAAATATTTTTCGCGCGCGATCAGCGCCCACGCGACCTTCGGCAAAGGCCCGCACGACAGTTTCCAGTGCGATA
TCGTCGCGCATGTCATGCAGGGACTGGTGCTGAAAGGGCATGGTCAGGCGCAGGACGCGCATGTGGCCTTCGAGGGCGCG
GCCGATCGCATCGAAAAGCAGCTGCGGCGCTATATGCGACGATTGAAGGATCGCAACAACGGGCCGGCCGAACCTTCGCC
GACGATCGACGAGATCGAGGATAATGCCAGCTACACCGTTTTCGATCCGGGAACCGAGGAAGACGAGGCGGGCGACGCGC
CGGCGATCATCGCCGAAACGCGCGTCGACATCCCCAACAGCAGCGTCTCCGACGCGGTGATGATGCTCGATTTGCGCAAC
ACCAACGCGCTGTTGTTCGTCAACAGCAAGACCGGCGCGCATAATATGGTCTATCGCCGCGACGACGGGACGATCGGCTG
GGTCGAACCACGATAG

Upstream 100 bases:

>100_bases
CCACGCCGAGTTTGTCGCAGGGCTCAACCAGCCACTGTGGCTCGATACGGTGTGACGACTCCCCCATCGTCGTCGCGCCG
GCCATAGAAGGAGAAGAAAA

Downstream 100 bases:

>100_bases
GACTGGATTTTCTTCGCCATCCGGCTTAAGGGCCGCGCCCAACGATGCCCGAAGCCCGGATGGCGGCGGGCCTGCCACGA
CAGATCCGCGATCGCTTGCC

Product: sigma 54 modulation protein/ribosomal protein S30EA

Products: NA

Alternate protein names: ORF203 [H]

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MEIRVSGHQIETGEALQAHVADRMNAIADKYFSRAISAHATFGKGPHDSFQCDIVAHVMQGLVLKGHGQAQDAHVAFEGA
ADRIEKQLRRYMRRLKDRNNGPAEPSPTIDEIEDNASYTVFDPGTEEDEAGDAPAIIAETRVDIPNSSVSDAVMMLDLRN
TNALLFVNSKTGAHNMVYRRDDGTIGWVEPR

Sequences:

>Translated_191_residues
MEIRVSGHQIETGEALQAHVADRMNAIADKYFSRAISAHATFGKGPHDSFQCDIVAHVMQGLVLKGHGQAQDAHVAFEGA
ADRIEKQLRRYMRRLKDRNNGPAEPSPTIDEIEDNASYTVFDPGTEEDEAGDAPAIIAETRVDIPNSSVSDAVMMLDLRN
TNALLFVNSKTGAHNMVYRRDDGTIGWVEPR
>Mature_191_residues
MEIRVSGHQIETGEALQAHVADRMNAIADKYFSRAISAHATFGKGPHDSFQCDIVAHVMQGLVLKGHGQAQDAHVAFEGA
ADRIEKQLRRYMRRLKDRNNGPAEPSPTIDEIEDNASYTVFDPGTEEDEAGDAPAIIAETRVDIPNSSVSDAVMMLDLRN
TNALLFVNSKTGAHNMVYRRDDGTIGWVEPR

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21030; Mature: 21030

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIRVSGHQIETGEALQAHVADRMNAIADKYFSRAISAHATFGKGPHDSFQCDIVAHVMQ
CEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
GLVLKGHGQAQDAHVAFEGAADRIEKQLRRYMRRLKDRNNGPAEPSPTIDEIEDNASYTV
CEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEE
FDPGTEEDEAGDAPAIIAETRVDIPNSSVSDAVMMLDLRNTNALLFVNSKTGAHNMVYRR
ECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEC
DDGTIGWVEPR
CCCEEEECCCC
>Mature Secondary Structure
MEIRVSGHQIETGEALQAHVADRMNAIADKYFSRAISAHATFGKGPHDSFQCDIVAHVMQ
CEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
GLVLKGHGQAQDAHVAFEGAADRIEKQLRRYMRRLKDRNNGPAEPSPTIDEIEDNASYTV
CEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEE
FDPGTEEDEAGDAPAIIAETRVDIPNSSVSDAVMMLDLRNTNALLFVNSKTGAHNMVYRR
ECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEC
DDGTIGWVEPR
CCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1991712; 12597275 [H]