| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is ptsN [H]
Identifier: 103488313
GI number: 103488313
Start: 2990144
End: 2990608
Strand: Reverse
Name: ptsN [H]
Synonym: Sala_2836
Alternate gene names: 103488313
Gene position: 2990608-2990144 (Counterclockwise)
Preceding gene: 103488314
Following gene: 103488312
Centisome position: 89.4
GC content: 66.45
Gene sequence:
>465_bases ATGAATCTTTCTTCTCTTCTCTATCCGGCGACGGTGCGCGCGCACGTCCATATCGATTCGAAAAAGGCGCTGTTTCCCTT CGTCGGCGATCTGGCCAGTCGCTCGCTGGGTCTCGACGCCGGCGAAGTGAGCGAAGCCTTGCTCGAACGCGAACGGCTCG GCTCGACAGGGTTCGGTCGCGGCATCGCGCTGCCCCACGCCAAGATGGCCGACCTCGGCGGCGTGCGCGGCCTGTTCCTC CAGCTCGCGCGGCCGATCGACTTCAATGCTGTCGATGGCCTGCCGGTCGACCTGCTCTTTGTTCTGCTCTCGCCGCTCGA TGCCGGTGCCGACCATCTGAAGGCGCTGGCCGGCGTGTCGCGGATGCTGCGCAACGAAGCGATCGCCGAACGGCTGCGCG GCGCGAAGAACGACGAGGCGCTCTACGCGCTCCTCGCCGACAGCGAAGCGCGTGACGCGGCCTGA
Upstream 100 bases:
>100_bases CGAAGCCCGGATGGCGGCGGGCCTGCCACGACAGATCCGCGATCGCTTGCCAGCCCTTGTTTCTGGCGGTGTCCGGCGTT TTACAAGATTTGATCCGACG
Downstream 100 bases:
>100_bases CAATAAATCAGCCGGGCCCCTGCGACGGCAGGGGCGCCTCATCTGCCGTCACGGTTCAAGTTTATCCCACTTCAGGTCGA CAGCGTCGGTGATCGGCCCC
Product: putative PTS IIA-like nitrogen-regulatory protein PtsN
Products: protein histidine; sugar phosphate
Alternate protein names: Enzyme IIA-NTR; PTS system EIIA component; Phosphotransferase enzyme IIA component [H]
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MNLSSLLYPATVRAHVHIDSKKALFPFVGDLASRSLGLDAGEVSEALLERERLGSTGFGRGIALPHAKMADLGGVRGLFL QLARPIDFNAVDGLPVDLLFVLLSPLDAGADHLKALAGVSRMLRNEAIAERLRGAKNDEALYALLADSEARDAA
Sequences:
>Translated_154_residues MNLSSLLYPATVRAHVHIDSKKALFPFVGDLASRSLGLDAGEVSEALLERERLGSTGFGRGIALPHAKMADLGGVRGLFL QLARPIDFNAVDGLPVDLLFVLLSPLDAGADHLKALAGVSRMLRNEAIAERLRGAKNDEALYALLADSEARDAA >Mature_154_residues MNLSSLLYPATVRAHVHIDSKKALFPFVGDLASRSLGLDAGEVSEALLERERLGSTGFGRGIALPHAKMADLGGVRGLFL QLARPIDFNAVDGLPVDLLFVLLSPLDAGADHLKALAGVSRMLRNEAIAERLRGAKNDEALYALLADSEARDAA
Specific function: Seems to have a role in regulating nitrogen assimilation [H]
COG id: COG1762
COG function: function code GT; Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1789597, Length=150, Percent_Identity=44.6666666666667, Blast_Score=131, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR006320 [H]
Pfam domain/function: PF00359 PTS_EIIA_2 [H]
EC number: 2.7.1.69
Molecular weight: Translated: 16357; Mature: 16357
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00372 PTS_EIIA_TYPE_2_HIS ; PS51094 PTS_EIIA_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSSLLYPATVRAHVHIDSKKALFPFVGDLASRSLGLDAGEVSEALLERERLGSTGFGR CCCCHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC GIALPHAKMADLGGVRGLFLQLARPIDFNAVDGLPVDLLFVLLSPLDAGADHLKALAGVS CCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH RMLRNEAIAERLRGAKNDEALYALLADSEARDAA HHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCC >Mature Secondary Structure MNLSSLLYPATVRAHVHIDSKKALFPFVGDLASRSLGLDAGEVSEALLERERLGSTGFGR CCCCHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC GIALPHAKMADLGGVRGLFLQLARPIDFNAVDGLPVDLLFVLLSPLDAGADHLKALAGVS CCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH RMLRNEAIAERLRGAKNDEALYALLADSEARDAA HHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: Phospho group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7876255; 8444818; 8025669; 9278503; 9636714 [H]