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The map label for this gene is ompA [H]

Identifier: 103488202

GI number: 103488202

Start: 2871052

End: 2871936

Strand: Reverse

Name: ompA [H]

Synonym: Sala_2725

Alternate gene names: 103488202

Gene position: 2871936-2871052 (Counterclockwise)

Preceding gene: 103488203

Following gene: 103488200

Centisome position: 85.85

GC content: 63.28

Gene sequence:

>885_bases
ATGAGTGCGGTTTCCAGAAGTCCGAAATTGCTGTTGCTGCTGACCATGCTGGCGGTGCCTGCGACGGGCAGCCTCGCCAT
GCAGGCACAGGACGAAGGTGCGGAGAGCGACGTCATGGCCACCGTCTATGGCGAGCGGATCCCCGACCCGTCGCAAATGG
CGAAAGGGCCCGAGCTCGAAGGCATCATCTCGGCGCGCAGCGGCAACCAGATCCAGGTCACGACCGCCGATGGCGTGAAA
ACCGTGGTCATCGTCAATGAAAATACGCGCGTGAAGTCCAGCGGCGGCTTCCTCGGTTTGAGCCGCAACAAGCTCGCCAC
CGACGCGCTGCTGAACGGCCTGCCCGTCAAGGTCGATACGCGGCAATGGGAAGGCGGCCTGTTCGCGAGCGAGGTCGATC
TCAAGAGCAAGGATTTGCGCACGGCGTCGATGATCCACACCGGCACCGACCAGCGCTTTGCCGAACAGACCGCGGCGACC
GAGGCGCTGCGCAGCCGCGTCGGCGACATCGACCAGTATAATGTCAAAAACACGACCAATGTGAACTTCGACGTCGGCAA
GGCGGTGCTGTCGGCGCAGGCCAAGGCCGATCTCTGCGCGACCGCGGCCGCGGCGGAGGCGATGGACAATGCGCTGCTGC
TCGTCGTCGGCTACACCGATTCGACGGGAAGCCAGGAGTTCAACCAGATGCTCAGCGAAAAGCGCGCCGGCGCGGTGGTC
AATCATCTGCAACAGGCGTGCGGCTGGAAACCCTATCGGATGCTGACGCCGACCGGCATGGCCGAAGCCGATCCTGCGGC
AGACAATGAAACACCCGAAGGCAAGGCGCAGAACCGCCGTGTCGCGGTGAATGTGCTGGTCAGCAAGGGTCTCGACGGTA
TGTAA

Upstream 100 bases:

>100_bases
CAATTACCGGCGCGGTGCGTCAACGCGCTTGCCCCGCATCACCGGCTCGCGGAAAGGGCGAGGTGATCACGCGGGGGCGG
CTCATTGAAGGAGTAGGGTA

Downstream 100 bases:

>100_bases
GGCTGACGGGGCGGCGCTTTGCAAGGGACAGCGCCGCCCCGCTTCGTTGCGGACCCTGGGGGGTGGTCCGCCGCGATCGT
CTGATGCCGGGATCAGGGCG

Product: OmpA/MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSAVSRSPKLLLLLTMLAVPATGSLAMQAQDEGAESDVMATVYGERIPDPSQMAKGPELEGIISARSGNQIQVTTADGVK
TVVIVNENTRVKSSGGFLGLSRNKLATDALLNGLPVKVDTRQWEGGLFASEVDLKSKDLRTASMIHTGTDQRFAEQTAAT
EALRSRVGDIDQYNVKNTTNVNFDVGKAVLSAQAKADLCATAAAAEAMDNALLLVVGYTDSTGSQEFNQMLSEKRAGAVV
NHLQQACGWKPYRMLTPTGMAEADPAADNETPEGKAQNRRVAVNVLVSKGLDGM

Sequences:

>Translated_294_residues
MSAVSRSPKLLLLLTMLAVPATGSLAMQAQDEGAESDVMATVYGERIPDPSQMAKGPELEGIISARSGNQIQVTTADGVK
TVVIVNENTRVKSSGGFLGLSRNKLATDALLNGLPVKVDTRQWEGGLFASEVDLKSKDLRTASMIHTGTDQRFAEQTAAT
EALRSRVGDIDQYNVKNTTNVNFDVGKAVLSAQAKADLCATAAAAEAMDNALLLVVGYTDSTGSQEFNQMLSEKRAGAVV
NHLQQACGWKPYRMLTPTGMAEADPAADNETPEGKAQNRRVAVNVLVSKGLDGM
>Mature_293_residues
SAVSRSPKLLLLLTMLAVPATGSLAMQAQDEGAESDVMATVYGERIPDPSQMAKGPELEGIISARSGNQIQVTTADGVKT
VVIVNENTRVKSSGGFLGLSRNKLATDALLNGLPVKVDTRQWEGGLFASEVDLKSKDLRTASMIHTGTDQRFAEQTAATE
ALRSRVGDIDQYNVKNTTNVNFDVGKAVLSAQAKADLCATAAAAEAMDNALLLVVGYTDSTGSQEFNQMLSEKRAGAVVN
HLQQACGWKPYRMLTPTGMAEADPAADNETPEGKAQNRRVAVNVLVSKGLDGM

Specific function: Structural protein that may protect the integrity of the bacterium [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=121, Percent_Identity=38.0165289256198, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 31129; Mature: 30997

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVSRSPKLLLLLTMLAVPATGSLAMQAQDEGAESDVMATVYGERIPDPSQMAKGPELE
CCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHCCCCCC
GIISARSGNQIQVTTADGVKTVVIVNENTRVKSSGGFLGLSRNKLATDALLNGLPVKVDT
EEEEECCCCEEEEEECCCEEEEEEECCCCEEECCCCEEEECCCHHHHHHHHCCCCEEEEC
RQWEGGLFASEVDLKSKDLRTASMIHTGTDQRFAEQTAATEALRSRVGDIDQYNVKNTTN
CCCCCCEEEEECCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VNFDVGKAVLSAQAKADLCATAAAAEAMDNALLLVVGYTDSTGSQEFNQMLSEKRAGAVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
NHLQQACGWKPYRMLTPTGMAEADPAADNETPEGKAQNRRVAVNVLVSKGLDGM
HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCC
>Mature Secondary Structure 
SAVSRSPKLLLLLTMLAVPATGSLAMQAQDEGAESDVMATVYGERIPDPSQMAKGPELE
CCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHCCCCCC
GIISARSGNQIQVTTADGVKTVVIVNENTRVKSSGGFLGLSRNKLATDALLNGLPVKVDT
EEEEECCCCEEEEEECCCEEEEEEECCCCEEECCCCEEEECCCHHHHHHHHCCCCEEEEC
RQWEGGLFASEVDLKSKDLRTASMIHTGTDQRFAEQTAATEALRSRVGDIDQYNVKNTTN
CCCCCCEEEEECCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VNFDVGKAVLSAQAKADLCATAAAAEAMDNALLLVVGYTDSTGSQEFNQMLSEKRAGAVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
NHLQQACGWKPYRMLTPTGMAEADPAADNETPEGKAQNRRVAVNVLVSKGLDGM
HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1447140 [H]