Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488177

Identifier: 103488177

GI number: 103488177

Start: 2842341

End: 2842766

Strand: Reverse

Name: 103488177

Synonym: Sala_2700

Alternate gene names: NA

Gene position: 2842766-2842341 (Counterclockwise)

Preceding gene: 103488178

Following gene: 103488175

Centisome position: 84.98

GC content: 63.85

Gene sequence:

>426_bases
ATGAAGGCGCAGTCGCTACTCTTGCTCCGCATCGGAACTGGATTGCTGCTCGTCGTGTGGGGCCTTATCCGCCTCGTCAG
CCCTGACAAGGGCGCGGGGGTCAGCGTCAAATATTATGCCGGGCTCGGCGCGAGCGATACGATTCAGCTCATCTGGGGCG
CGATCCTGCTGGTCGTCGGACTGCTCACGGTCGTTGGTCTTTTTCGCCGTTTCGCTTACCCGGCGCAGGCGGTCATTCTG
GTGACGGGGGCGCTGTCGATATGGAAATATCTGCTCGACCCGCTCGGTCTCTGGCTCCTCGACCGCGAAAGCAGCCAGGT
GCTATTCTTCCCCTCGCTGGCCGTCGCGGGGGCGACGCTCGTGCTCCTCGCCTTCCGGGATGAAGACCGGCTTGCGCTCG
ACCGCTTGCTGGCGCGGCGCGGTTAA

Upstream 100 bases:

>100_bases
CTGGCGACGCGGATAAGGCAATTTGCCGGCCGTTTATTGTAACCAACGGGTGCATTGCCGCGAATCCACCTGTTCAATCA
GCATTTCAGGGAGTCCAGAT

Downstream 100 bases:

>100_bases
CGCGCGCGTTCGAGCATCGCCACAATCTCGTCCTCGCGCGTCGCGGCGCCTGCGGCCACGCGCTGCGGCCCCTCGTAGAT
GTGGAGCATGCCATAGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKAQSLLLLRIGTGLLLVVWGLIRLVSPDKGAGVSVKYYAGLGASDTIQLIWGAILLVVGLLTVVGLFRRFAYPAQAVIL
VTGALSIWKYLLDPLGLWLLDRESSQVLFFPSLAVAGATLVLLAFRDEDRLALDRLLARRG

Sequences:

>Translated_141_residues
MKAQSLLLLRIGTGLLLVVWGLIRLVSPDKGAGVSVKYYAGLGASDTIQLIWGAILLVVGLLTVVGLFRRFAYPAQAVIL
VTGALSIWKYLLDPLGLWLLDRESSQVLFFPSLAVAGATLVLLAFRDEDRLALDRLLARRG
>Mature_141_residues
MKAQSLLLLRIGTGLLLVVWGLIRLVSPDKGAGVSVKYYAGLGASDTIQLIWGAILLVVGLLTVVGLFRRFAYPAQAVIL
VTGALSIWKYLLDPLGLWLLDRESSQVLFFPSLAVAGATLVLLAFRDEDRLALDRLLARRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15304; Mature: 15304

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAQSLLLLRIGTGLLLVVWGLIRLVSPDKGAGVSVKYYAGLGASDTIQLIWGAILLVVG
CCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
LLTVVGLFRRFAYPAQAVILVTGALSIWKYLLDPLGLWLLDRESSQVLFFPSLAVAGATL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECHHHHHHHHH
VLLAFRDEDRLALDRLLARRG
EEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKAQSLLLLRIGTGLLLVVWGLIRLVSPDKGAGVSVKYYAGLGASDTIQLIWGAILLVVG
CCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
LLTVVGLFRRFAYPAQAVILVTGALSIWKYLLDPLGLWLLDRESSQVLFFPSLAVAGATL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECHHHHHHHHH
VLLAFRDEDRLALDRLLARRG
EEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA