Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103488165
Identifier: 103488165
GI number: 103488165
Start: 2831261
End: 2831716
Strand: Reverse
Name: 103488165
Synonym: Sala_2688
Alternate gene names: NA
Gene position: 2831716-2831261 (Counterclockwise)
Preceding gene: 103488166
Following gene: 103488164
Centisome position: 84.65
GC content: 63.6
Gene sequence:
>456_bases ATGAAGATTGCAGCTATCGTTTCCCGAAAGGGGCGCGAGTTCGAGACCGTCGATGAAAGGTCGTCCCTGGCCGAGGCTGT CGATGTGATGCATCGCAAGGCCATCGGGTCGGTCGGCGTGGCGACGGGGCGTGGAGCCATCATCTCCGGACTCGTTTCAC AGCAGGAACTGACTTCGGCGATCGCGCTGCACGGCGCCGATGCATTGAGCCGACCCGTGGCGGATTTCATGCGCAAACCC GTATTATCCTGTCGCTGTGACGACAATGCGGCCGACGTGATGCACGTAATGACCCGCGAGCGCTGCCGTCACGCGGTCGT CTGGAATGCCGCTGGCACAATAGCGGGCCTTGTGTCGCTCGGCGATCTTGTCGCGGCGCTGCTCGAAGAGGCGCGGCTCG AAGCCGGCGTCTTGCGCGATCTCGCGCGTTCGCGCCTGCTTGCGATGCCGGGATAG
Upstream 100 bases:
>100_bases TTGACCTTCCCTTTTCAGGCGCGCGGCTCCGGTCTGTGTAACCAGTGTCCTGCATCCTCCGAATCCAGCACAGGGAAGCG AGCAACTGGAGGTTTCGGAC
Downstream 100 bases:
>100_bases GCCATGGGCTTGCTGCTTGGCATCGGGCGGCTGCTGGCCGGATATCTGACAGGTCCGTCGCGGGCGCCCTATGCCAATGT TCCCACGGACGAATCCGCTC
Product: CBS domain-containing protein
Products: NA
Alternate protein names: CBS Domain-Containing Protein; Signal-Transduction Protein With CBS Domains; CBS Domain Containing Membrane Protein; CBS Domains; Inosine-5-Monophosphate Dehydrogenase; Inosine-5prime-Monophosphate Dehydrogenase Protein; Signal Transduction Protein With CBS Domains
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKIAAIVSRKGREFETVDERSSLAEAVDVMHRKAIGSVGVATGRGAIISGLVSQQELTSAIALHGADALSRPVADFMRKP VLSCRCDDNAADVMHVMTRERCRHAVVWNAAGTIAGLVSLGDLVAALLEEARLEAGVLRDLARSRLLAMPG
Sequences:
>Translated_151_residues MKIAAIVSRKGREFETVDERSSLAEAVDVMHRKAIGSVGVATGRGAIISGLVSQQELTSAIALHGADALSRPVADFMRKP VLSCRCDDNAADVMHVMTRERCRHAVVWNAAGTIAGLVSLGDLVAALLEEARLEAGVLRDLARSRLLAMPG >Mature_151_residues MKIAAIVSRKGREFETVDERSSLAEAVDVMHRKAIGSVGVATGRGAIISGLVSQQELTSAIALHGADALSRPVADFMRKP VLSCRCDDNAADVMHVMTRERCRHAVVWNAAGTIAGLVSLGDLVAALLEEARLEAGVLRDLARSRLLAMPG
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16016; Mature: 16016
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAAIVSRKGREFETVDERSSLAEAVDVMHRKAIGSVGVATGRGAIISGLVSQQELTSA CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH IALHGADALSRPVADFMRKPVLSCRCDDNAADVMHVMTRERCRHAVVWNAAGTIAGLVSL HHHHCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GDLVAALLEEARLEAGVLRDLARSRLLAMPG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKIAAIVSRKGREFETVDERSSLAEAVDVMHRKAIGSVGVATGRGAIISGLVSQQELTSA CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH IALHGADALSRPVADFMRKPVLSCRCDDNAADVMHVMTRERCRHAVVWNAAGTIAGLVSL HHHHCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GDLVAALLEEARLEAGVLRDLARSRLLAMPG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA