Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488132

Identifier: 103488132

GI number: 103488132

Start: 2802746

End: 2803267

Strand: Reverse

Name: 103488132

Synonym: Sala_2655

Alternate gene names: NA

Gene position: 2803267-2802746 (Counterclockwise)

Preceding gene: 103488133

Following gene: 103488131

Centisome position: 83.8

GC content: 59.39

Gene sequence:

>522_bases
ATGATGGCCGACTATTACACTCCGACCGTGGTCGAACCATTTATTCCGCTCAGCGCCATGCTGCCGATCGAACGCCTGTT
CCTTGCACAGGTGTTCGATGAGGAAATCGCTGACGATACTGCCTATTACTACAGCGAGGACGGTGCCAACGACCTTATCT
TCATGCCCGTTGGCGACGTCCGGGCAGCCCTCGATGCGGCCAAGCCCGACACCAGCCGTCTTGCGCAAAAGCTGCTCGAC
GAGCAGCCCGATGCGATTCTTGGCGAGGATGACATTGAACTCGACATGTGCGGCGACATCTGGGCCGACGTGCTGCAGGA
CATCGTGCGCCGCTCGCCAGACCTCGATCATCTGACGGTGACCATGGCCTTCACCTGTTCGAAGATGCGGGTCGATGGCT
TCGGCGGCCTCGCCATGCTGATCACCGCCGAGGCCATCCGTTCGGAATCGACCAACACGCTGTTCGACCGCTTCTACAAG
GAAGCTCAGGCCAACGGGGAGATCGGTTATGGCAATCCCTGA

Upstream 100 bases:

>100_bases
TCGAGGCCGTCGCTGCCTGACAAACGGCAACCGCACATTGTCAAACAAACCACCGCCCTCGGCGCCCATCGCCGGGGGGC
AAAACATATCAAGGAGCCAG

Downstream 100 bases:

>100_bases
TTACGCCCGCGCCAATTTCGAGACGCTGGTGAAAGCTGCCAAGGCGGGCGATCTGGCGCTGATGGAATGCACCGAGGTGG
AAAGCGGCGAGACCCGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MMADYYTPTVVEPFIPLSAMLPIERLFLAQVFDEEIADDTAYYYSEDGANDLIFMPVGDVRAALDAAKPDTSRLAQKLLD
EQPDAILGEDDIELDMCGDIWADVLQDIVRRSPDLDHLTVTMAFTCSKMRVDGFGGLAMLITAEAIRSESTNTLFDRFYK
EAQANGEIGYGNP

Sequences:

>Translated_173_residues
MMADYYTPTVVEPFIPLSAMLPIERLFLAQVFDEEIADDTAYYYSEDGANDLIFMPVGDVRAALDAAKPDTSRLAQKLLD
EQPDAILGEDDIELDMCGDIWADVLQDIVRRSPDLDHLTVTMAFTCSKMRVDGFGGLAMLITAEAIRSESTNTLFDRFYK
EAQANGEIGYGNP
>Mature_173_residues
MMADYYTPTVVEPFIPLSAMLPIERLFLAQVFDEEIADDTAYYYSEDGANDLIFMPVGDVRAALDAAKPDTSRLAQKLLD
EQPDAILGEDDIELDMCGDIWADVLQDIVRRSPDLDHLTVTMAFTCSKMRVDGFGGLAMLITAEAIRSESTNTLFDRFYK
EAQANGEIGYGNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19219; Mature: 19219

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMADYYTPTVVEPFIPLSAMLPIERLFLAQVFDEEIADDTAYYYSEDGANDLIFMPVGDV
CCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEECHHH
RAALDAAKPDTSRLAQKLLDEQPDAILGEDDIELDMCGDIWADVLQDIVRRSPDLDHLTV
HHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEE
TMAFTCSKMRVDGFGGLAMLITAEAIRSESTNTLFDRFYKEAQANGEIGYGNP
EEEEEECCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MMADYYTPTVVEPFIPLSAMLPIERLFLAQVFDEEIADDTAYYYSEDGANDLIFMPVGDV
CCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEECHHH
RAALDAAKPDTSRLAQKLLDEQPDAILGEDDIELDMCGDIWADVLQDIVRRSPDLDHLTV
HHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEE
TMAFTCSKMRVDGFGGLAMLITAEAIRSESTNTLFDRFYKEAQANGEIGYGNP
EEEEEECCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA