| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is 103488131
Identifier: 103488131
GI number: 103488131
Start: 2802544
End: 2802759
Strand: Reverse
Name: 103488131
Synonym: Sala_2654
Alternate gene names: NA
Gene position: 2802759-2802544 (Counterclockwise)
Preceding gene: 103488132
Following gene: 103488129
Centisome position: 83.79
GC content: 61.57
Gene sequence:
>216_bases ATGGCAATCCCTGATTACGCCCGCGCCAATTTCGAGACGCTGGTGAAAGCTGCCAAGGCGGGCGATCTGGCGCTGATGGA ATGCACCGAGGTGGAAAGCGGCGAGACCCGCTTTGTAATCTGCGCCGTGGGCCGCGATGAAGGCGACTATGTGATGACGC CGTTCGGTCATCTCGCTCCCGGCAACCCCTACGAAGCCTATATCCCGCCCGCCTGA
Upstream 100 bases:
>100_bases CTCGCCATGCTGATCACCGCCGAGGCCATCCGTTCGGAATCGACCAACACGCTGTTCGACCGCTTCTACAAGGAAGCTCA GGCCAACGGGGAGATCGGTT
Downstream 100 bases:
>100_bases GCGCGCCTCGGCGACCTCCCGAAGCGCAAGCGATTGATCACTCGCGCCGACGGCGCCTTGATCGGAGCGTGCGTCGCATC GAGCGCAGGTTGAACCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MAIPDYARANFETLVKAAKAGDLALMECTEVESGETRFVICAVGRDEGDYVMTPFGHLAPGNPYEAYIPPA
Sequences:
>Translated_71_residues MAIPDYARANFETLVKAAKAGDLALMECTEVESGETRFVICAVGRDEGDYVMTPFGHLAPGNPYEAYIPPA >Mature_70_residues AIPDYARANFETLVKAAKAGDLALMECTEVESGETRFVICAVGRDEGDYVMTPFGHLAPGNPYEAYIPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7653; Mature: 7522
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPDYARANFETLVKAAKAGDLALMECTEVESGETRFVICAVGRDEGDYVMTPFGHLAP CCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCCEEECCCCCCCC GNPYEAYIPPA CCCCEEEECCC >Mature Secondary Structure AIPDYARANFETLVKAAKAGDLALMECTEVESGETRFVICAVGRDEGDYVMTPFGHLAP CCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCCEEECCCCCCCC GNPYEAYIPPA CCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA