Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488106

Identifier: 103488106

GI number: 103488106

Start: 2767074

End: 2767391

Strand: Reverse

Name: 103488106

Synonym: Sala_2628

Alternate gene names: NA

Gene position: 2767391-2767074 (Counterclockwise)

Preceding gene: 103488108

Following gene: 103488104

Centisome position: 82.73

GC content: 64.47

Gene sequence:

>318_bases
ATGGCAAAGATCGGCAGCTTCAGACAAGTTTCGGGTGAACTCCGGGGCCAGATCGTCACTCTCTCGGTTCAGGCCAAGTC
GGTCCGCATCGTCGCGGACGAACAGGCCAGCGGCAATGCGCCCAGCCACCGGGTCTATGTCGGCGACGTCGAGGTCGGTG
CGGCCTGGAGCAAGCGGACCAGCGACGACCGGCCCTATCTCTCGGTCAAGCTCGATGATCCCAGCTTCGTCGCTCCCATC
TTCGCGCAGCTCTTCGCAGGCGAGGATGGCGAACATGACCTGGTCTGGAACCGGCCTGCCCGCCGCGAGCGCGATTGA

Upstream 100 bases:

>100_bases
TTCGCTGCGGGCCTTCGGCTGCGGCGCCGTTCGCCTGCCGGCTTGTCCAACGCATCGAGGCCGCGATCGGCGCGGGTTCG
AAGCGAAAGGAACAGACATC

Downstream 100 bases:

>100_bases
CGCTCGGAATGATCCGCCGGCTCTCACTGAGCCGGCGGACATCCCCATAAATGGGGATCCGCCTCCCTAGTTGTTGGAAT
AGCCCGCAAAAACGCCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MAKIGSFRQVSGELRGQIVTLSVQAKSVRIVADEQASGNAPSHRVYVGDVEVGAAWSKRTSDDRPYLSVKLDDPSFVAPI
FAQLFAGEDGEHDLVWNRPARRERD

Sequences:

>Translated_105_residues
MAKIGSFRQVSGELRGQIVTLSVQAKSVRIVADEQASGNAPSHRVYVGDVEVGAAWSKRTSDDRPYLSVKLDDPSFVAPI
FAQLFAGEDGEHDLVWNRPARRERD
>Mature_104_residues
AKIGSFRQVSGELRGQIVTLSVQAKSVRIVADEQASGNAPSHRVYVGDVEVGAAWSKRTSDDRPYLSVKLDDPSFVAPIF
AQLFAGEDGEHDLVWNRPARRERD

Specific function: Unknown

COG id: COG5489

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007948 [H]

Pfam domain/function: PF05284 DUF736 [H]

EC number: NA

Molecular weight: Translated: 11583; Mature: 11452

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIGSFRQVSGELRGQIVTLSVQAKSVRIVADEQASGNAPSHRVYVGDVEVGAAWSKRT
CCCCCCHHHHCCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCEEEECCEEECCCCCCCC
SDDRPYLSVKLDDPSFVAPIFAQLFAGEDGEHDLVWNRPARRERD
CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure 
AKIGSFRQVSGELRGQIVTLSVQAKSVRIVADEQASGNAPSHRVYVGDVEVGAAWSKRT
CCCCCHHHHCCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCEEEECCEEECCCCCCCC
SDDRPYLSVKLDDPSFVAPIFAQLFAGEDGEHDLVWNRPARRERD
CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]