Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488104

Identifier: 103488104

GI number: 103488104

Start: 2766168

End: 2766512

Strand: Reverse

Name: 103488104

Synonym: Sala_2626

Alternate gene names: NA

Gene position: 2766512-2766168 (Counterclockwise)

Preceding gene: 103488106

Following gene: 103488103

Centisome position: 82.7

GC content: 69.28

Gene sequence:

>345_bases
GTGATCGTGCGCGACGAGGCGATCGATCTACGCCACGCGGCAGCGCAGCGGCTCGATCGGCGCCTGGCAGGCGCCCCGCC
CATGCGCCTGCCGCCCGGCTTCGCGCCGACGCCGTTCCAGCGGCGGCGTCTCGGCATGCTTCTCGACATTCTCGATGCCG
TTCTCGGCCGCGAGCGAACCGGGATCACGACCCACGAGATCGCCCGTCGCTATGTCTATCCTGCCATGACCATCGGCCGC
GGCAATGGATGGAAATCCTCCGCCGAGCGCCGCCGCACCCAGCGCCTGATCGACGAGGCGCTCGCTCTCATGAACGGAGG
ATATCGCGCCTTGCTGCGCGGCTGA

Upstream 100 bases:

>100_bases
CCGCACACTCTCGACCGGCCGTCATGTCGTCCTCGGCGACATCGACGGCCCGCACCGCCTCTGGGTCCGCGATCCGCTCA
AAGGCAGTGCGCTTGCCTAT

Downstream 100 bases:

>100_bases
TCCCGCCGGTGCGACAAAAATAGCCAACGCAAAACAGCCGCTCCATCCCGACGCTCATGCTCCGCCACTTTCCTCCAGTC
CGGTTGATCGCCGCCGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MIVRDEAIDLRHAAAQRLDRRLAGAPPMRLPPGFAPTPFQRRRLGMLLDILDAVLGRERTGITTHEIARRYVYPAMTIGR
GNGWKSSAERRRTQRLIDEALALMNGGYRALLRG

Sequences:

>Translated_114_residues
MIVRDEAIDLRHAAAQRLDRRLAGAPPMRLPPGFAPTPFQRRRLGMLLDILDAVLGRERTGITTHEIARRYVYPAMTIGR
GNGWKSSAERRRTQRLIDEALALMNGGYRALLRG
>Mature_114_residues
MIVRDEAIDLRHAAAQRLDRRLAGAPPMRLPPGFAPTPFQRRRLGMLLDILDAVLGRERTGITTHEIARRYVYPAMTIGR
GNGWKSSAERRRTQRLIDEALALMNGGYRALLRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12876; Mature: 12876

Theoretical pI: Translated: 12.03; Mature: 12.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVRDEAIDLRHAAAQRLDRRLAGAPPMRLPPGFAPTPFQRRRLGMLLDILDAVLGRERT
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
GITTHEIARRYVYPAMTIGRGNGWKSSAERRRTQRLIDEALALMNGGYRALLRG
CCCHHHHHHHHHCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MIVRDEAIDLRHAAAQRLDRRLAGAPPMRLPPGFAPTPFQRRRLGMLLDILDAVLGRERT
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
GITTHEIARRYVYPAMTIGRGNGWKSSAERRRTQRLIDEALALMNGGYRALLRG
CCCHHHHHHHHHCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA