Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488099

Identifier: 103488099

GI number: 103488099

Start: 2763164

End: 2763508

Strand: Reverse

Name: 103488099

Synonym: Sala_2621

Alternate gene names: NA

Gene position: 2763508-2763164 (Counterclockwise)

Preceding gene: 103488100

Following gene: 103488098

Centisome position: 82.61

GC content: 66.96

Gene sequence:

>345_bases
ATGCAGATAGGTTGCTTCACCCAAGACGGCGACGGGTTCGTCGGCCGTCTGCGCACGCTCACGCTCGGTGTCGCGCTGCG
GCTCGTGCCGACCGGCTTCACCGGGCAGGGCCGCGCACCGGACTGGCGCGTCCATCTCGCCGACGATAGCGTACCTGAAG
GCATTGGTCCCGAGGTCGGATCGGGCTGGAACCATGACGGCAAGACCGGCGTGTTCGTCACGATCCAGCTCGATTGTCCG
GGTTTCGCTCGTCCGATCCGCGCCAATCTCCTGCGCTCCAATCGCGGCGATGACGGCCATGTCCTGCTCTGGTCGCCGCG
CCTGCGGCGTCCGAAAGCGGAGTGA

Upstream 100 bases:

>100_bases
CCACCCCGATCCTCACCCGCGACACACCGAATGCGCCGCTGCGCTGGCGCTCCGGCTGCGCGCGGGGTGCCCCTCTCACC
AGCGAAGAAGGAGTCATCTT

Downstream 100 bases:

>100_bases
ACCGTGCGCATCCGCTTCGCGTCGCGCTGCCGGTCCTGCGCCGTTCGCCTCGCTAGCGCATCGGCCTTGACCGGCACACT
CGCCTCCCTCTTTCCGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MQIGCFTQDGDGFVGRLRTLTLGVALRLVPTGFTGQGRAPDWRVHLADDSVPEGIGPEVGSGWNHDGKTGVFVTIQLDCP
GFARPIRANLLRSNRGDDGHVLLWSPRLRRPKAE

Sequences:

>Translated_114_residues
MQIGCFTQDGDGFVGRLRTLTLGVALRLVPTGFTGQGRAPDWRVHLADDSVPEGIGPEVGSGWNHDGKTGVFVTIQLDCP
GFARPIRANLLRSNRGDDGHVLLWSPRLRRPKAE
>Mature_114_residues
MQIGCFTQDGDGFVGRLRTLTLGVALRLVPTGFTGQGRAPDWRVHLADDSVPEGIGPEVGSGWNHDGKTGVFVTIQLDCP
GFARPIRANLLRSNRGDDGHVLLWSPRLRRPKAE

Specific function: Unknown

COG id: COG5489

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12402; Mature: 12402

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIGCFTQDGDGFVGRLRTLTLGVALRLVPTGFTGQGRAPDWRVHLADDSVPEGIGPEVG
CCCCEEEECCCCHHHHHHHHEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCC
SGWNHDGKTGVFVTIQLDCPGFARPIRANLLRSNRGDDGHVLLWSPRLRRPKAE
CCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MQIGCFTQDGDGFVGRLRTLTLGVALRLVPTGFTGQGRAPDWRVHLADDSVPEGIGPEVG
CCCCEEEECCCCHHHHHHHHEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCC
SGWNHDGKTGVFVTIQLDCPGFARPIRANLLRSNRGDDGHVLLWSPRLRRPKAE
CCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA