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The map label for this gene is yjbJ [H]

Identifier: 103488098

GI number: 103488098

Start: 2762372

End: 2763160

Strand: Reverse

Name: yjbJ [H]

Synonym: Sala_2620

Alternate gene names: 103488098

Gene position: 2763160-2762372 (Counterclockwise)

Preceding gene: 103488099

Following gene: 103488097

Centisome position: 82.6

GC content: 69.33

Gene sequence:

>789_bases
GTGCGCATCCGCTTCGCGTCGCGCTGCCGGTCCTGCGCCGTTCGCCTCGCTAGCGCATCGGCCTTGACCGGCACACTCGC
CTCCCTCTTTCCGGCTACGACTGTGCTGGCCACCGCGCCTGCCGCTGTCGCGACGGCGCATCCCTACGCTGCCCATGTTG
CCGACGCCGCACAGCGCTTCGGCCTTCCCGAGGCATGGATCTGGGCGGTGATGCGCGCCGAGAGCAACGGCGATCCGGCG
GCGATTTCACGCGCCGGCGCCATGGGGCTCATGCAGATCATGCCCGGCACCTGGGGTCAGCTCACCGCACGCTACGGGCT
CGGCGACAACCCCTGGGATGTGCGCGCCAATATCCATGCCGGCGCGGCCTATCTGCGCGAGATGGTCGATCGGTATCGCG
ATCTGTCCACCGCGCTCGCTGCCTATAATGCTGGGCCGGGCCGTGTCGACGACTGGCGCCGGCGCGGCCGTCCGCTTCCC
GACGAGACGATCACCTATGTCGCGAAGCTCGCGCCCAACCTCGGCACCTCCGGCATCGCTTCGCCTGCCGTCGTGCCTGC
AATTCCGCGCGCACCGGCTGCACCATCCTGGCACGACGCGGCGCTGTTCGTGCTGCGTGGTGACGGCGGATTGGATGACA
GCCAAGCCGTCGCCGATCCCGCGCCCGTATCTCAGCCCGGCGACATTGCATCCGCGCCTGTCTCGTTGCCCTCGGGCCTC
CCGCGGCGCCCTTCATCGCCTGGTTCGCACGGCCTCTTCGTCCCCCTTTCCGGGCAGAGCGAACAATGA

Upstream 100 bases:

>100_bases
TCGTCCGATCCGCGCCAATCTCCTGCGCTCCAATCGCGGCGATGACGGCCATGTCCTGCTCTGGTCGCCGCGCCTGCGGC
GTCCGAAAGCGGAGTGAACC

Downstream 100 bases:

>100_bases
GCGGTCATGGCGTCCGTTGGCGTTGGCAGGCGTGGAATCTACAGCGTCGGAAAAGAGCACAGCGCACTGGAATCGAAGGG
GAAAGTCGATGGCGAGATAA

Product: lytic transglycosylase, catalytic

Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MRIRFASRCRSCAVRLASASALTGTLASLFPATTVLATAPAAVATAHPYAAHVADAAQRFGLPEAWIWAVMRAESNGDPA
AISRAGAMGLMQIMPGTWGQLTARYGLGDNPWDVRANIHAGAAYLREMVDRYRDLSTALAAYNAGPGRVDDWRRRGRPLP
DETITYVAKLAPNLGTSGIASPAVVPAIPRAPAAPSWHDAALFVLRGDGGLDDSQAVADPAPVSQPGDIASAPVSLPSGL
PRRPSSPGSHGLFVPLSGQSEQ

Sequences:

>Translated_262_residues
MRIRFASRCRSCAVRLASASALTGTLASLFPATTVLATAPAAVATAHPYAAHVADAAQRFGLPEAWIWAVMRAESNGDPA
AISRAGAMGLMQIMPGTWGQLTARYGLGDNPWDVRANIHAGAAYLREMVDRYRDLSTALAAYNAGPGRVDDWRRRGRPLP
DETITYVAKLAPNLGTSGIASPAVVPAIPRAPAAPSWHDAALFVLRGDGGLDDSQAVADPAPVSQPGDIASAPVSLPSGL
PRRPSSPGSHGLFVPLSGQSEQ
>Mature_262_residues
MRIRFASRCRSCAVRLASASALTGTLASLFPATTVLATAPAAVATAHPYAAHVADAAQRFGLPEAWIWAVMRAESNGDPA
AISRAGAMGLMQIMPGTWGQLTARYGLGDNPWDVRANIHAGAAYLREMVDRYRDLSTALAAYNAGPGRVDDWRRRGRPLP
DETITYVAKLAPNLGTSGIASPAVVPAIPRAPAAPSWHDAALFVLRGDGGLDDSQAVADPAPVSQPGDIASAPVSLPSGL
PRRPSSPGSHGLFVPLSGQSEQ

Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 27292; Mature: 27292

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRFASRCRSCAVRLASASALTGTLASLFPATTVLATAPAAVATAHPYAAHVADAAQRF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHC
GLPEAWIWAVMRAESNGDPAAISRAGAMGLMQIMPGTWGQLTARYGLGDNPWDVRANIHA
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCEEEECCHH
GAAYLREMVDRYRDLSTALAAYNAGPGRVDDWRRRGRPLPDETITYVAKLAPNLGTSGIA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC
SPAVVPAIPRAPAAPSWHDAALFVLRGDGGLDDSQAVADPAPVSQPGDIASAPVSLPSGL
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
PRRPSSPGSHGLFVPLSGQSEQ
CCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MRIRFASRCRSCAVRLASASALTGTLASLFPATTVLATAPAAVATAHPYAAHVADAAQRF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHC
GLPEAWIWAVMRAESNGDPAAISRAGAMGLMQIMPGTWGQLTARYGLGDNPWDVRANIHA
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCEEEECCHH
GAAYLREMVDRYRDLSTALAAYNAGPGRVDDWRRRGRPLPDETITYVAKLAPNLGTSGIA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC
SPAVVPAIPRAPAAPSWHDAALFVLRGDGGLDDSQAVADPAPVSQPGDIASAPVSLPSGL
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
PRRPSSPGSHGLFVPLSGQSEQ
CCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]