Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488031

Identifier: 103488031

GI number: 103488031

Start: 2692826

End: 2693254

Strand: Reverse

Name: 103488031

Synonym: Sala_2553

Alternate gene names: NA

Gene position: 2693254-2692826 (Counterclockwise)

Preceding gene: 103488035

Following gene: 103488030

Centisome position: 80.51

GC content: 59.67

Gene sequence:

>429_bases
TTGGGAATAGCCGGTGTTCGGGCGCCCAAGCTTGACTCGATTCAGCAACAGGCAGAGAATGTCTGTATGGGACGAGCGCG
AAAATTTGCGCTGATCTTAGGCGTCTTACTCGGCCTGTTCGGACAGATTGTCACAGTCGCCGCAAGTCCTGCTGTGGCAA
CGTCCATGAGCGCAACCGCGCCAGCGACGATGCCGATGGACTGCGCCGGAATGATGCCAGGCGATGGTGAGGAGTCGCTG
CCCTGCCAGCGGATGACGCTTGCTTGCCTGGCCGGCATGGGTTGTCTCCCCCTGTTTGCGCTCGATAGCCGCTCATCGCC
ACTTCCGGAAATGGTGAGCACGGATCTGCTTGTCATCTCGCCATTTTATCCGGCGCTACATGGACGATCGGCTCAGCCCG
AACAGCATCCACCCAACGCCTTGGCCTGA

Upstream 100 bases:

>100_bases
CGCGAAGTCATCGAACGCAGCGCATGAACTGGTGGATGTCTCACCGCGGAAGTGACATTCCAAAGGTAGCAAACCCGCAG
ATTATGGCGGGCCCGCGGGC

Downstream 100 bases:

>100_bases
AAATTCGTCAGGCGAACGCTTCCGAACGCTGGACAGCGCCGCGCGCTGCCCACCCCTTCGGGGCCGGTTTGCCCGAGGCA
CTTTCAGTCCAAGGAGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MGIAGVRAPKLDSIQQQAENVCMGRARKFALILGVLLGLFGQIVTVAASPAVATSMSATAPATMPMDCAGMMPGDGEESL
PCQRMTLACLAGMGCLPLFALDSRSSPLPEMVSTDLLVISPFYPALHGRSAQPEQHPPNALA

Sequences:

>Translated_142_residues
MGIAGVRAPKLDSIQQQAENVCMGRARKFALILGVLLGLFGQIVTVAASPAVATSMSATAPATMPMDCAGMMPGDGEESL
PCQRMTLACLAGMGCLPLFALDSRSSPLPEMVSTDLLVISPFYPALHGRSAQPEQHPPNALA
>Mature_141_residues
GIAGVRAPKLDSIQQQAENVCMGRARKFALILGVLLGLFGQIVTVAASPAVATSMSATAPATMPMDCAGMMPGDGEESLP
CQRMTLACLAGMGCLPLFALDSRSSPLPEMVSTDLLVISPFYPALHGRSAQPEQHPPNALA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14725; Mature: 14593

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
10.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
9.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIAGVRAPKLDSIQQQAENVCMGRARKFALILGVLLGLFGQIVTVAASPAVATSMSATA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
PATMPMDCAGMMPGDGEESLPCQRMTLACLAGMGCLPLFALDSRSSPLPEMVSTDLLVIS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHEEECCCCCCCHHHHCCCEEEEC
PFYPALHGRSAQPEQHPPNALA
CCCHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GIAGVRAPKLDSIQQQAENVCMGRARKFALILGVLLGLFGQIVTVAASPAVATSMSATA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
PATMPMDCAGMMPGDGEESLPCQRMTLACLAGMGCLPLFALDSRSSPLPEMVSTDLLVIS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHEEECCCCCCCHHHHCCCEEEEC
PFYPALHGRSAQPEQHPPNALA
CCCHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA