| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488030
Identifier: 103488030
GI number: 103488030
Start: 2692390
End: 2692722
Strand: Reverse
Name: 103488030
Synonym: Sala_2552
Alternate gene names: NA
Gene position: 2692722-2692390 (Counterclockwise)
Preceding gene: 103488031
Following gene: 103488022
Centisome position: 80.5
GC content: 66.37
Gene sequence:
>333_bases ATGAAGACCTTGATATTCAGCGCGTCGGTGGCCGCATTCACGATGCTCGTCGCCGCCCCGGTTCCGGTATTGGCACAGGC AGATGTCGAGAAACCGGCTGCCAGCAAATGCGTGTGGTCCCAGGCTCCCGGCCCGCGTGCGCCGCTGCGTCGGGTCTGCG AAAAGATCGTCGACCCGCGCGAGCAGATGGCAGGGGTCGGCGGACCGGAATGCGATCCTGCCTACACCGGCAAAACCGGC CGCTATGTGTGGCGGGCGCGACCGCAATATGGTCCGCGTGCGCCGTTGCAGGGACCGGTCCGCGTTTGGGTCGACGGGCG CGATGTCTGCTGA
Upstream 100 bases:
>100_bases TTCGTCAGGCGAACGCTTCCGAACGCTGGACAGCGCCGCGCGCTGCCCACCCCTTCGGGGCCGGTTTGCCCGAGGCACTT TCAGTCCAAGGAGAGCAATC
Downstream 100 bases:
>100_bases CTCATGATGTGATGGCGAGGTGGTAACTTGGCCTCGACATGGATCATGGATCGGGCGAACATTGCCTGTTCCAAACTTTT CGGAGTTCTTCGGGAGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MKTLIFSASVAAFTMLVAAPVPVLAQADVEKPAASKCVWSQAPGPRAPLRRVCEKIVDPREQMAGVGGPECDPAYTGKTG RYVWRARPQYGPRAPLQGPVRVWVDGRDVC
Sequences:
>Translated_110_residues MKTLIFSASVAAFTMLVAAPVPVLAQADVEKPAASKCVWSQAPGPRAPLRRVCEKIVDPREQMAGVGGPECDPAYTGKTG RYVWRARPQYGPRAPLQGPVRVWVDGRDVC >Mature_110_residues MKTLIFSASVAAFTMLVAAPVPVLAQADVEKPAASKCVWSQAPGPRAPLRRVCEKIVDPREQMAGVGGPECDPAYTGKTG RYVWRARPQYGPRAPLQGPVRVWVDGRDVC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11877; Mature: 11877
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLIFSASVAAFTMLVAAPVPVLAQADVEKPAASKCVWSQAPGPRAPLRRVCEKIVDPR CCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCH EQMAGVGGPECDPAYTGKTGRYVWRARPQYGPRAPLQGPVRVWVDGRDVC HHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MKTLIFSASVAAFTMLVAAPVPVLAQADVEKPAASKCVWSQAPGPRAPLRRVCEKIVDPR CCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCH EQMAGVGGPECDPAYTGKTGRYVWRARPQYGPRAPLQGPVRVWVDGRDVC HHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA