| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487635
Identifier: 103487635
GI number: 103487635
Start: 2264845
End: 2265261
Strand: Direct
Name: 103487635
Synonym: Sala_2154
Alternate gene names: NA
Gene position: 2264845-2265261 (Clockwise)
Preceding gene: 103487630
Following gene: 103487641
Centisome position: 67.7
GC content: 62.59
Gene sequence:
>417_bases ATGAACGAGACGTCCCCCCGCGCCAGCGGCCAATGCCATTGCGGCGCAATCCGGTATTCGATGAGCACGGCGGTGCAGCA TCATGCCCTGTGTCATTGCAGCGATTGTCGTCGCCACGCGGGTGCGCCGATGGTCGGGTGGGGGCTGGTCGGCATCGACG AGATCGAGATCAGCGGGACGCCGGAAATCTATGCTTCGTCCGAACATGGCCGCCGCCATTTCTGCGGGAATTGCGGCACC GGCCTCTTTTATACCAACGATCAGATTTTCCCCGGTCAGATCGATGTGCAGACCGCGACGCTCGACGATCCCGACCTGAT CCCGGTGCAGGCGCAGATCCAGACAGCCGAGCGCATCGGCTGGATGGAAAGGCTGGTCGACCTGCCCGCGTTCGAGCGTT ACCCGCCCTTTGAATAG
Upstream 100 bases:
>100_bases TCGCTGCCAGCAATTGCCGCATGGCTTCTGAAAAAGGATTCAAATTGCCCACCGGCTGATGTTTATGATATGTTCTTTCT TCAATCCTGAGGAGAGAACG
Downstream 100 bases:
>100_bases CGCCGGTCGCCATCGTCCGCGGCGACCACCGCCGCAACCAGCTTCGCAATGTCCAGCCGGTTCGCGCTGTCGTCATACCC CTGGCGGACGATCACCAGCG
Product: glutathione-dependent formaldehyde-activating, GFA
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MNETSPRASGQCHCGAIRYSMSTAVQHHALCHCSDCRRHAGAPMVGWGLVGIDEIEISGTPEIYASSEHGRRHFCGNCGT GLFYTNDQIFPGQIDVQTATLDDPDLIPVQAQIQTAERIGWMERLVDLPAFERYPPFE
Sequences:
>Translated_138_residues MNETSPRASGQCHCGAIRYSMSTAVQHHALCHCSDCRRHAGAPMVGWGLVGIDEIEISGTPEIYASSEHGRRHFCGNCGT GLFYTNDQIFPGQIDVQTATLDDPDLIPVQAQIQTAERIGWMERLVDLPAFERYPPFE >Mature_138_residues MNETSPRASGQCHCGAIRYSMSTAVQHHALCHCSDCRRHAGAPMVGWGLVGIDEIEISGTPEIYASSEHGRRHFCGNCGT GLFYTNDQIFPGQIDVQTATLDDPDLIPVQAQIQTAERIGWMERLVDLPAFERYPPFE
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15263; Mature: 15263
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNETSPRASGQCHCGAIRYSMSTAVQHHALCHCSDCRRHAGAPMVGWGLVGIDEIEISGT CCCCCCCCCCCEEEEEEEHHHHHHHHHHHEECCHHHHHHCCCCEECCEEECEEEEEECCC PEIYASSEHGRRHFCGNCGTGLFYTNDQIFPGQIDVQTATLDDPDLIPVQAQIQTAERIG CCEEECCCCCCCCCCCCCCCCEEEECCEECCCEEEEEEECCCCCCEEEHHHHHHHHHHHH WMERLVDLPAFERYPPFE HHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNETSPRASGQCHCGAIRYSMSTAVQHHALCHCSDCRRHAGAPMVGWGLVGIDEIEISGT CCCCCCCCCCCEEEEEEEHHHHHHHHHHHEECCHHHHHHCCCCEECCEEECEEEEEECCC PEIYASSEHGRRHFCGNCGTGLFYTNDQIFPGQIDVQTATLDDPDLIPVQAQIQTAERIG CCEEECCCCCCCCCCCCCCCCEEEECCEECCCEEEEEEECCCCCCEEEHHHHHHHHHHHH WMERLVDLPAFERYPPFE HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA