Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yibF [C]

Identifier: 103487623

GI number: 103487623

Start: 2249385

End: 2250056

Strand: Direct

Name: yibF [C]

Synonym: Sala_2142

Alternate gene names: 103487623

Gene position: 2249385-2250056 (Clockwise)

Preceding gene: 103487622

Following gene: 103487625

Centisome position: 67.24

GC content: 61.61

Gene sequence:

>672_bases
ATGTGGCAACTCTATCAATTTCCGCTCTGCCCCTTTTCGCGCAAGGTCCGCCTGCTGCTCGGCGAAAAGGGTGTCGGTTA
CGAATTGGTGCGCGAATCGCCGTGGGAGCGGCGCGACGAGTTCATCGACCTCAATCCCGCGGGTCGCACCCCGGTGATGG
TCGATCAGGTGCGCGGGCAGGTGCTGATCGACAGCATGGCGATCGCCGAATATTTCGAGGAGACGGTCGAGGGCAAGGCG
ATGATCAACGGCACCGCCGCCAACCGCGCTGAAATCCGCCGCCTGACCGCCTGGTTCGATCAGGATTTCTATTATGAAGT
CACCGGGCCTTTGCTGTTCGAGCGGATGCAGAAGCGCATCGTTCACCGCCAACCGCCCGACAGCGGCGCGCTGCGCGAGG
CGATGAAGGCGGCGAATAATCATCTCGACTATATCGACTATCTGATCGATCACCGCACATGGCTCGCCGGCGCGACGATG
AGCCTCGCCGATCTGGCGGCCGCCGCGCATATATCGGTTGCCGACTATCTGGGCGGAATCGACTGGACCGGGCACGAGCA
GACAAAGGGCTGGTATTCGGGGCTGAAATCGCGGCCTTCGTTCCGCCCGCTGCTGGCCGAGCGGATGGAAATCATCACGC
CGCCCAAATACTACGAGGACGTCGACTTCTGA

Upstream 100 bases:

>100_bases
TTCGGAAGTGGGCCACTGCCTTCGCGGGGGCACAATGTGGTGTGGACGATTGCGTCCATAGGCGTTGCACCCCCTGCCCT
GCTGCCGCTATGCCAGATTC

Downstream 100 bases:

>100_bases
ACCGCGTCATTGCGGGGGCCCGAAGGCAACGCGGCAAAATCCAGCCCTTGATCCTTGCGCGGGAGATTGCTTCGCTGCGC
TCGCAATGACCATCCTCGGG

Product: glutathione S-transferase-like protein

Products: NA

Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Protein; Unkown Function; Glutathione S-Transferase C-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S- Transferase N-Terminal

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MWQLYQFPLCPFSRKVRLLLGEKGVGYELVRESPWERRDEFIDLNPAGRTPVMVDQVRGQVLIDSMAIAEYFEETVEGKA
MINGTAANRAEIRRLTAWFDQDFYYEVTGPLLFERMQKRIVHRQPPDSGALREAMKAANNHLDYIDYLIDHRTWLAGATM
SLADLAAAAHISVADYLGGIDWTGHEQTKGWYSGLKSRPSFRPLLAERMEIITPPKYYEDVDF

Sequences:

>Translated_223_residues
MWQLYQFPLCPFSRKVRLLLGEKGVGYELVRESPWERRDEFIDLNPAGRTPVMVDQVRGQVLIDSMAIAEYFEETVEGKA
MINGTAANRAEIRRLTAWFDQDFYYEVTGPLLFERMQKRIVHRQPPDSGALREAMKAANNHLDYIDYLIDHRTWLAGATM
SLADLAAAAHISVADYLGGIDWTGHEQTKGWYSGLKSRPSFRPLLAERMEIITPPKYYEDVDF
>Mature_223_residues
MWQLYQFPLCPFSRKVRLLLGEKGVGYELVRESPWERRDEFIDLNPAGRTPVMVDQVRGQVLIDSMAIAEYFEETVEGKA
MINGTAANRAEIRRLTAWFDQDFYYEVTGPLLFERMQKRIVHRQPPDSGALREAMKAANNHLDYIDYLIDHRTWLAGATM
SLADLAAAAHISVADYLGGIDWTGHEQTKGWYSGLKSRPSFRPLLAERMEIITPPKYYEDVDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790018, Length=167, Percent_Identity=31.1377245508982, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25680; Mature: 25680

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWQLYQFPLCPFSRKVRLLLGEKGVGYELVRESPWERRDEFIDLNPAGRTPVMVDQVRGQ
CCCCCCCCCCCCCHHEEEEECCCCCCHHHHHCCCHHHHCCEEECCCCCCCCCHHHHHCCH
VLIDSMAIAEYFEETVEGKAMINGTAANRAEIRRLTAWFDQDFYYEVTGPLLFERMQKRI
HHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH
VHRQPPDSGALREAMKAANNHLDYIDYLIDHRTWLAGATMSLADLAAAAHISVADYLGGI
HCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
DWTGHEQTKGWYSGLKSRPSFRPLLAERMEIITPPKYYEDVDF
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MWQLYQFPLCPFSRKVRLLLGEKGVGYELVRESPWERRDEFIDLNPAGRTPVMVDQVRGQ
CCCCCCCCCCCCCHHEEEEECCCCCCHHHHHCCCHHHHCCEEECCCCCCCCCHHHHHCCH
VLIDSMAIAEYFEETVEGKAMINGTAANRAEIRRLTAWFDQDFYYEVTGPLLFERMQKRI
HHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH
VHRQPPDSGALREAMKAANNHLDYIDYLIDHRTWLAGATMSLADLAAAAHISVADYLGGI
HCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
DWTGHEQTKGWYSGLKSRPSFRPLLAERMEIITPPKYYEDVDF
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA