| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is yibF [C]
Identifier: 103487623
GI number: 103487623
Start: 2249385
End: 2250056
Strand: Direct
Name: yibF [C]
Synonym: Sala_2142
Alternate gene names: 103487623
Gene position: 2249385-2250056 (Clockwise)
Preceding gene: 103487622
Following gene: 103487625
Centisome position: 67.24
GC content: 61.61
Gene sequence:
>672_bases ATGTGGCAACTCTATCAATTTCCGCTCTGCCCCTTTTCGCGCAAGGTCCGCCTGCTGCTCGGCGAAAAGGGTGTCGGTTA CGAATTGGTGCGCGAATCGCCGTGGGAGCGGCGCGACGAGTTCATCGACCTCAATCCCGCGGGTCGCACCCCGGTGATGG TCGATCAGGTGCGCGGGCAGGTGCTGATCGACAGCATGGCGATCGCCGAATATTTCGAGGAGACGGTCGAGGGCAAGGCG ATGATCAACGGCACCGCCGCCAACCGCGCTGAAATCCGCCGCCTGACCGCCTGGTTCGATCAGGATTTCTATTATGAAGT CACCGGGCCTTTGCTGTTCGAGCGGATGCAGAAGCGCATCGTTCACCGCCAACCGCCCGACAGCGGCGCGCTGCGCGAGG CGATGAAGGCGGCGAATAATCATCTCGACTATATCGACTATCTGATCGATCACCGCACATGGCTCGCCGGCGCGACGATG AGCCTCGCCGATCTGGCGGCCGCCGCGCATATATCGGTTGCCGACTATCTGGGCGGAATCGACTGGACCGGGCACGAGCA GACAAAGGGCTGGTATTCGGGGCTGAAATCGCGGCCTTCGTTCCGCCCGCTGCTGGCCGAGCGGATGGAAATCATCACGC CGCCCAAATACTACGAGGACGTCGACTTCTGA
Upstream 100 bases:
>100_bases TTCGGAAGTGGGCCACTGCCTTCGCGGGGGCACAATGTGGTGTGGACGATTGCGTCCATAGGCGTTGCACCCCCTGCCCT GCTGCCGCTATGCCAGATTC
Downstream 100 bases:
>100_bases ACCGCGTCATTGCGGGGGCCCGAAGGCAACGCGGCAAAATCCAGCCCTTGATCCTTGCGCGGGAGATTGCTTCGCTGCGC TCGCAATGACCATCCTCGGG
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Protein; Unkown Function; Glutathione S-Transferase C-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S- Transferase N-Terminal
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MWQLYQFPLCPFSRKVRLLLGEKGVGYELVRESPWERRDEFIDLNPAGRTPVMVDQVRGQVLIDSMAIAEYFEETVEGKA MINGTAANRAEIRRLTAWFDQDFYYEVTGPLLFERMQKRIVHRQPPDSGALREAMKAANNHLDYIDYLIDHRTWLAGATM SLADLAAAAHISVADYLGGIDWTGHEQTKGWYSGLKSRPSFRPLLAERMEIITPPKYYEDVDF
Sequences:
>Translated_223_residues MWQLYQFPLCPFSRKVRLLLGEKGVGYELVRESPWERRDEFIDLNPAGRTPVMVDQVRGQVLIDSMAIAEYFEETVEGKA MINGTAANRAEIRRLTAWFDQDFYYEVTGPLLFERMQKRIVHRQPPDSGALREAMKAANNHLDYIDYLIDHRTWLAGATM SLADLAAAAHISVADYLGGIDWTGHEQTKGWYSGLKSRPSFRPLLAERMEIITPPKYYEDVDF >Mature_223_residues MWQLYQFPLCPFSRKVRLLLGEKGVGYELVRESPWERRDEFIDLNPAGRTPVMVDQVRGQVLIDSMAIAEYFEETVEGKA MINGTAANRAEIRRLTAWFDQDFYYEVTGPLLFERMQKRIVHRQPPDSGALREAMKAANNHLDYIDYLIDHRTWLAGATM SLADLAAAAHISVADYLGGIDWTGHEQTKGWYSGLKSRPSFRPLLAERMEIITPPKYYEDVDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790018, Length=167, Percent_Identity=31.1377245508982, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25680; Mature: 25680
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQLYQFPLCPFSRKVRLLLGEKGVGYELVRESPWERRDEFIDLNPAGRTPVMVDQVRGQ CCCCCCCCCCCCCHHEEEEECCCCCCHHHHHCCCHHHHCCEEECCCCCCCCCHHHHHCCH VLIDSMAIAEYFEETVEGKAMINGTAANRAEIRRLTAWFDQDFYYEVTGPLLFERMQKRI HHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH VHRQPPDSGALREAMKAANNHLDYIDYLIDHRTWLAGATMSLADLAAAAHISVADYLGGI HCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC DWTGHEQTKGWYSGLKSRPSFRPLLAERMEIITPPKYYEDVDF CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MWQLYQFPLCPFSRKVRLLLGEKGVGYELVRESPWERRDEFIDLNPAGRTPVMVDQVRGQ CCCCCCCCCCCCCHHEEEEECCCCCCHHHHHCCCHHHHCCEEECCCCCCCCCHHHHHCCH VLIDSMAIAEYFEETVEGKAMINGTAANRAEIRRLTAWFDQDFYYEVTGPLLFERMQKRI HHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH VHRQPPDSGALREAMKAANNHLDYIDYLIDHRTWLAGATMSLADLAAAAHISVADYLGGI HCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC DWTGHEQTKGWYSGLKSRPSFRPLLAERMEIITPPKYYEDVDF CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA