Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yihX [C]

Identifier: 103487602

GI number: 103487602

Start: 2227822

End: 2228469

Strand: Direct

Name: yihX [C]

Synonym: Sala_2121

Alternate gene names: 103487602

Gene position: 2227822-2228469 (Clockwise)

Preceding gene: 103487601

Following gene: 103487604

Centisome position: 66.6

GC content: 66.82

Gene sequence:

>648_bases
ATGACCTACACCACCGTCATTTTCGATTTCGGCGGCGTCATCACCGCCTCGCCCTTCGAGGCATTCAACCGGCTGGAGGC
CGAGCGCGGGCTGCCGCGCGATTTCATTCGCCGCGTCAACGCCGCCGACCCCGACGGCAACGCCTGGGCCCGCTTCGAGC
GCGCCGAGATCGACGCCGCGGCGTTCGACAGCCTGTTCGCGTCCGAGGCGCGCGCGATGGGCCACGAACTGGAAGGCGAA
GCGGTGCTGGCGGTGCTCGCCGGTGCGGTGCGTCCGGCGATGGTCGCGGCGCTCGACACGCTGAAAGCCCGCGACTTTGG
CACTGGGTGCATCACCAACAATGTGCCGTCGGGCAAGGGCGCCGGGATGGCGCGCAGCGAAGAACTCGCGGCCGAAGTTG
CGGCGATCATGGCGCGATTCGACCATGTGATCGAATCGAGCAAGGTCGGCGTGCGCAAGCCCGATCCGCGTATCTATGAA
ATGATGTGCGAGGCGCTGGGCGTGCAGCCCGCCGAATGCGTCTATCTCGACGACCTTGGCATCAACTGCAAACCCGCAAG
CCAGTTGGGGATGCACGCGATCAAGGTGACGAGCGGCGAACAGGCGCTCGCCGACCTGTCGGCGGTGCTGGGGATGGAGC
TGCCCTGA

Upstream 100 bases:

>100_bases
CGGCGATCGACACGCGCAAGGGCGGCGAAGCCGCGCTCGCCGCCTATCGCGAGATGCTGTCAGGCGCAGCCGACCCGCGG
AAGGGAATCGTCGTCGTGCC

Downstream 100 bases:

>100_bases
ATTGGCTGTTTTTTTGGGTGGGGAGTGGCCTGAAGCGATCCTCCCCCAACGGGGGAGGATCGCTTCAGGCCGCAATCGGT
CGTTTCCGGCCGTCCGGTTC

Product: epoxide hydrolase domain-containing phosphatase

Products: NA

Alternate protein names: HAD Family Phosphatase; Epoxide Hydrolase Domain-Containing Phosphatase; Hydrolase; Phosphatase; HAD Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Phosphoglycolate Phosphatase; Epoxide Hydrolase-Like Phosphatase; Epoxide Hydrolase

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MTYTTVIFDFGGVITASPFEAFNRLEAERGLPRDFIRRVNAADPDGNAWARFERAEIDAAAFDSLFASEARAMGHELEGE
AVLAVLAGAVRPAMVAALDTLKARDFGTGCITNNVPSGKGAGMARSEELAAEVAAIMARFDHVIESSKVGVRKPDPRIYE
MMCEALGVQPAECVYLDDLGINCKPASQLGMHAIKVTSGEQALADLSAVLGMELP

Sequences:

>Translated_215_residues
MTYTTVIFDFGGVITASPFEAFNRLEAERGLPRDFIRRVNAADPDGNAWARFERAEIDAAAFDSLFASEARAMGHELEGE
AVLAVLAGAVRPAMVAALDTLKARDFGTGCITNNVPSGKGAGMARSEELAAEVAAIMARFDHVIESSKVGVRKPDPRIYE
MMCEALGVQPAECVYLDDLGINCKPASQLGMHAIKVTSGEQALADLSAVLGMELP
>Mature_214_residues
TYTTVIFDFGGVITASPFEAFNRLEAERGLPRDFIRRVNAADPDGNAWARFERAEIDAAAFDSLFASEARAMGHELEGEA
VLAVLAGAVRPAMVAALDTLKARDFGTGCITNNVPSGKGAGMARSEELAAEVAAIMARFDHVIESSKVGVRKPDPRIYEM
MCEALGVQPAECVYLDDLGINCKPASQLGMHAIKVTSGEQALADLSAVLGMELP

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI48976061, Length=220, Percent_Identity=33.6363636363636, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI211971008, Length=201, Percent_Identity=32.8358208955224, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI27597073, Length=227, Percent_Identity=30.3964757709251, Blast_Score=92, Evalue=3e-19,
Organism=Escherichia coli, GI87082345, Length=192, Percent_Identity=29.6875, Blast_Score=67, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17562446, Length=220, Percent_Identity=30.4545454545455, Blast_Score=99, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17557590, Length=226, Percent_Identity=28.7610619469027, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71988582, Length=232, Percent_Identity=25, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22893; Mature: 22762

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYTTVIFDFGGVITASPFEAFNRLEAERGLPRDFIRRVNAADPDGNAWARFERAEIDAA
CCEEEEEEECCCCEECCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHH
AFDSLFASEARAMGHELEGEAVLAVLAGAVRPAMVAALDTLKARDFGTGCITNNVPSGKG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
AGMARSEELAAEVAAIMARFDHVIESSKVGVRKPDPRIYEMMCEALGVQPAECVYLDDLG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC
INCKPASQLGMHAIKVTSGEQALADLSAVLGMELP
CCCCCHHHHCCEEEEECCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TYTTVIFDFGGVITASPFEAFNRLEAERGLPRDFIRRVNAADPDGNAWARFERAEIDAA
CEEEEEEECCCCEECCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHH
AFDSLFASEARAMGHELEGEAVLAVLAGAVRPAMVAALDTLKARDFGTGCITNNVPSGKG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
AGMARSEELAAEVAAIMARFDHVIESSKVGVRKPDPRIYEMMCEALGVQPAECVYLDDLG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC
INCKPASQLGMHAIKVTSGEQALADLSAVLGMELP
CCCCCHHHHCCEEEEECCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA