Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103487599

Identifier: 103487599

GI number: 103487599

Start: 2225011

End: 2225931

Strand: Direct

Name: 103487599

Synonym: Sala_2118

Alternate gene names: NA

Gene position: 2225011-2225931 (Clockwise)

Preceding gene: 103487596

Following gene: 103487600

Centisome position: 66.51

GC content: 63.41

Gene sequence:

>921_bases
ATGGCCGAGTTTGAACTGATCGCCGACGGACTGCGCTTTCCCGAGGCGCCGGTGGTGATGGACGACGGCAGCGTCATCGT
CACCGAAGTCGCCGCGGGGCGGATCACGCGCTGCTGGCCCGGTGGCAGAAAACAGGTGATCGCGACACCCGGCGGCGGCC
CCAACGGCCTGGCGATCGGTCCCGACGGCAAGCTCTATTGCTGCAACAATGGCGGGTTCAACTATGTCGAATCGAACGGC
TATCTGGCGCCGCACGGCATCGCCGACGATTATTCTGGCGGGCGGATCGAGCGGATCGACATCGCGACGGGCGCGGTCGA
GGTGCTTTACCAGTCGGGCGATCACGGCGTGGTGCTGCGCGGCCCCAACGACCTGATGTTCGACAGCCACGGCGGCTTCT
GGTTCACCGACCATGGCAAGGTCGATTATGCCAAGCGCTGTCACGACATCGTCGGCATCTTTTATGCCAAGGCCGACGGC
AGTTTTATCGAGGAAGTGATCTTTCCGAGCTATAACCCCAACGGCATCGGCCTCTCGCCCGACGGGAGCAAGCTCTACGC
CGCGGAAACCTATACCTGCCGGCTGACCCGGTTCAACATCGTCGCGCCCGGCAAGGTCGACGATGCCGCAGGACCGGGCG
GCCCCGGCATTCCGCTCTATCGCCCCGCGGGCTATAAGTTCTTCGACAGCCTTGCGATGGAAGCGAACGGCAATATCGCC
GTCGCGACGATCGGCGAATGCGGGATCAGCGTCGTTTCGCCCACGGGCGAGCTGGTCGAGTTCGTCGCCACCGACGATAT
TTTCACGACCAACATCGCCTTTGGCGGGCCCGACCGGCAGGATGCCTATATCACCCTGTCGGGAACCGGAAGACTGGTGA
AGACACGCTGGACGCGGCCGGGATTGCCGTTGCCATATTGA

Upstream 100 bases:

>100_bases
GGTGCCGATGTCGGCTTCGTAGAAAGTGCTGGCGAAGAGCGTGCGAACGGGCATGATGGCCGCAAAGCACAGCCGATGAG
CGAGAGCAAGGGAGATGGGG

Downstream 100 bases:

>100_bases
GAGGGCCGCGATGCACGAGGAAAATCACGCGGTCACGCGCATCGGCTGGCTACGGGCGGCGATCCTGGGCGCCAACGACG
GGATCGTCTCGACGGCAAGC

Product: putative gluconolactonase precursor

Products: D-gluconate

Alternate protein names: SMP-30/Gluconolaconase/LRE Domain-Containing Protein; SMP-30/Gluconolaconase/LRE Domain Protein; SMP-30/Gluconolaconase/LRE-Like Region-Containing Protein; Antibiotic Induced Protein Drp; Glconolactonase; Lactonase; Senescence Marker Protein-

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MAEFELIADGLRFPEAPVVMDDGSVIVTEVAAGRITRCWPGGRKQVIATPGGGPNGLAIGPDGKLYCCNNGGFNYVESNG
YLAPHGIADDYSGGRIERIDIATGAVEVLYQSGDHGVVLRGPNDLMFDSHGGFWFTDHGKVDYAKRCHDIVGIFYAKADG
SFIEEVIFPSYNPNGIGLSPDGSKLYAAETYTCRLTRFNIVAPGKVDDAAGPGGPGIPLYRPAGYKFFDSLAMEANGNIA
VATIGECGISVVSPTGELVEFVATDDIFTTNIAFGGPDRQDAYITLSGTGRLVKTRWTRPGLPLPY

Sequences:

>Translated_306_residues
MAEFELIADGLRFPEAPVVMDDGSVIVTEVAAGRITRCWPGGRKQVIATPGGGPNGLAIGPDGKLYCCNNGGFNYVESNG
YLAPHGIADDYSGGRIERIDIATGAVEVLYQSGDHGVVLRGPNDLMFDSHGGFWFTDHGKVDYAKRCHDIVGIFYAKADG
SFIEEVIFPSYNPNGIGLSPDGSKLYAAETYTCRLTRFNIVAPGKVDDAAGPGGPGIPLYRPAGYKFFDSLAMEANGNIA
VATIGECGISVVSPTGELVEFVATDDIFTTNIAFGGPDRQDAYITLSGTGRLVKTRWTRPGLPLPY
>Mature_305_residues
AEFELIADGLRFPEAPVVMDDGSVIVTEVAAGRITRCWPGGRKQVIATPGGGPNGLAIGPDGKLYCCNNGGFNYVESNGY
LAPHGIADDYSGGRIERIDIATGAVEVLYQSGDHGVVLRGPNDLMFDSHGGFWFTDHGKVDYAKRCHDIVGIFYAKADGS
FIEEVIFPSYNPNGIGLSPDGSKLYAAETYTCRLTRFNIVAPGKVDDAAGPGGPGIPLYRPAGYKFFDSLAMEANGNIAV
ATIGECGISVVSPTGELVEFVATDDIFTTNIAFGGPDRQDAYITLSGTGRLVKTRWTRPGLPLPY

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.1.17

Molecular weight: Translated: 32515; Mature: 32384

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEFELIADGLRFPEAPVVMDDGSVIVTEVAAGRITRCWPGGRKQVIATPGGGPNGLAIG
CCCCEEEECCCCCCCCCEEEECCCEEEEEECCCCEEEECCCCCEEEEECCCCCCCCEEEC
PDGKLYCCNNGGFNYVESNGYLAPHGIADDYSGGRIERIDIATGAVEVLYQSGDHGVVLR
CCCCEEEECCCCCCEEECCCEECCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEE
GPNDLMFDSHGGFWFTDHGKVDYAKRCHDIVGIFYAKADGSFIEEVIFPSYNPNGIGLSP
CCCCEEEECCCCEEEECCCCCCHHHHHHHEEEEEEEECCCHHHHHHHCCCCCCCCCEECC
DGSKLYAAETYTCRLTRFNIVAPGKVDDAAGPGGPGIPLYRPAGYKFFDSLAMEANGNIA
CCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCEE
VATIGECGISVVSPTGELVEFVATDDIFTTNIAFGGPDRQDAYITLSGTGRLVKTRWTRP
EEEECCCCEEEECCCHHHEEEEECCCEEEEEEEECCCCCCCEEEEEECCCCEEEEEECCC
GLPLPY
CCCCCC
>Mature Secondary Structure 
AEFELIADGLRFPEAPVVMDDGSVIVTEVAAGRITRCWPGGRKQVIATPGGGPNGLAIG
CCCEEEECCCCCCCCCEEEECCCEEEEEECCCCEEEECCCCCEEEEECCCCCCCCEEEC
PDGKLYCCNNGGFNYVESNGYLAPHGIADDYSGGRIERIDIATGAVEVLYQSGDHGVVLR
CCCCEEEECCCCCCEEECCCEECCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEE
GPNDLMFDSHGGFWFTDHGKVDYAKRCHDIVGIFYAKADGSFIEEVIFPSYNPNGIGLSP
CCCCEEEECCCCEEEECCCCCCHHHHHHHEEEEEEEECCCHHHHHHHCCCCCCCCCEECC
DGSKLYAAETYTCRLTRFNIVAPGKVDDAAGPGGPGIPLYRPAGYKFFDSLAMEANGNIA
CCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCEE
VATIGECGISVVSPTGELVEFVATDDIFTTNIAFGGPDRQDAYITLSGTGRLVKTRWTRP
EEEECCCCEEEECCCHHHEEEEECCCEEEEEEEECCCCCCCEEEEEECCCCEEEEEECCC
GLPLPY
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-glucono-1,5-lactone; H2O

Specific reaction: D-glucono-1,5-lactone + H2O = D-gluconate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA