| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487599
Identifier: 103487599
GI number: 103487599
Start: 2225011
End: 2225931
Strand: Direct
Name: 103487599
Synonym: Sala_2118
Alternate gene names: NA
Gene position: 2225011-2225931 (Clockwise)
Preceding gene: 103487596
Following gene: 103487600
Centisome position: 66.51
GC content: 63.41
Gene sequence:
>921_bases ATGGCCGAGTTTGAACTGATCGCCGACGGACTGCGCTTTCCCGAGGCGCCGGTGGTGATGGACGACGGCAGCGTCATCGT CACCGAAGTCGCCGCGGGGCGGATCACGCGCTGCTGGCCCGGTGGCAGAAAACAGGTGATCGCGACACCCGGCGGCGGCC CCAACGGCCTGGCGATCGGTCCCGACGGCAAGCTCTATTGCTGCAACAATGGCGGGTTCAACTATGTCGAATCGAACGGC TATCTGGCGCCGCACGGCATCGCCGACGATTATTCTGGCGGGCGGATCGAGCGGATCGACATCGCGACGGGCGCGGTCGA GGTGCTTTACCAGTCGGGCGATCACGGCGTGGTGCTGCGCGGCCCCAACGACCTGATGTTCGACAGCCACGGCGGCTTCT GGTTCACCGACCATGGCAAGGTCGATTATGCCAAGCGCTGTCACGACATCGTCGGCATCTTTTATGCCAAGGCCGACGGC AGTTTTATCGAGGAAGTGATCTTTCCGAGCTATAACCCCAACGGCATCGGCCTCTCGCCCGACGGGAGCAAGCTCTACGC CGCGGAAACCTATACCTGCCGGCTGACCCGGTTCAACATCGTCGCGCCCGGCAAGGTCGACGATGCCGCAGGACCGGGCG GCCCCGGCATTCCGCTCTATCGCCCCGCGGGCTATAAGTTCTTCGACAGCCTTGCGATGGAAGCGAACGGCAATATCGCC GTCGCGACGATCGGCGAATGCGGGATCAGCGTCGTTTCGCCCACGGGCGAGCTGGTCGAGTTCGTCGCCACCGACGATAT TTTCACGACCAACATCGCCTTTGGCGGGCCCGACCGGCAGGATGCCTATATCACCCTGTCGGGAACCGGAAGACTGGTGA AGACACGCTGGACGCGGCCGGGATTGCCGTTGCCATATTGA
Upstream 100 bases:
>100_bases GGTGCCGATGTCGGCTTCGTAGAAAGTGCTGGCGAAGAGCGTGCGAACGGGCATGATGGCCGCAAAGCACAGCCGATGAG CGAGAGCAAGGGAGATGGGG
Downstream 100 bases:
>100_bases GAGGGCCGCGATGCACGAGGAAAATCACGCGGTCACGCGCATCGGCTGGCTACGGGCGGCGATCCTGGGCGCCAACGACG GGATCGTCTCGACGGCAAGC
Product: putative gluconolactonase precursor
Products: D-gluconate
Alternate protein names: SMP-30/Gluconolaconase/LRE Domain-Containing Protein; SMP-30/Gluconolaconase/LRE Domain Protein; SMP-30/Gluconolaconase/LRE-Like Region-Containing Protein; Antibiotic Induced Protein Drp; Glconolactonase; Lactonase; Senescence Marker Protein-
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MAEFELIADGLRFPEAPVVMDDGSVIVTEVAAGRITRCWPGGRKQVIATPGGGPNGLAIGPDGKLYCCNNGGFNYVESNG YLAPHGIADDYSGGRIERIDIATGAVEVLYQSGDHGVVLRGPNDLMFDSHGGFWFTDHGKVDYAKRCHDIVGIFYAKADG SFIEEVIFPSYNPNGIGLSPDGSKLYAAETYTCRLTRFNIVAPGKVDDAAGPGGPGIPLYRPAGYKFFDSLAMEANGNIA VATIGECGISVVSPTGELVEFVATDDIFTTNIAFGGPDRQDAYITLSGTGRLVKTRWTRPGLPLPY
Sequences:
>Translated_306_residues MAEFELIADGLRFPEAPVVMDDGSVIVTEVAAGRITRCWPGGRKQVIATPGGGPNGLAIGPDGKLYCCNNGGFNYVESNG YLAPHGIADDYSGGRIERIDIATGAVEVLYQSGDHGVVLRGPNDLMFDSHGGFWFTDHGKVDYAKRCHDIVGIFYAKADG SFIEEVIFPSYNPNGIGLSPDGSKLYAAETYTCRLTRFNIVAPGKVDDAAGPGGPGIPLYRPAGYKFFDSLAMEANGNIA VATIGECGISVVSPTGELVEFVATDDIFTTNIAFGGPDRQDAYITLSGTGRLVKTRWTRPGLPLPY >Mature_305_residues AEFELIADGLRFPEAPVVMDDGSVIVTEVAAGRITRCWPGGRKQVIATPGGGPNGLAIGPDGKLYCCNNGGFNYVESNGY LAPHGIADDYSGGRIERIDIATGAVEVLYQSGDHGVVLRGPNDLMFDSHGGFWFTDHGKVDYAKRCHDIVGIFYAKADGS FIEEVIFPSYNPNGIGLSPDGSKLYAAETYTCRLTRFNIVAPGKVDDAAGPGGPGIPLYRPAGYKFFDSLAMEANGNIAV ATIGECGISVVSPTGELVEFVATDDIFTTNIAFGGPDRQDAYITLSGTGRLVKTRWTRPGLPLPY
Specific function: Unknown
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.1.17
Molecular weight: Translated: 32515; Mature: 32384
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFELIADGLRFPEAPVVMDDGSVIVTEVAAGRITRCWPGGRKQVIATPGGGPNGLAIG CCCCEEEECCCCCCCCCEEEECCCEEEEEECCCCEEEECCCCCEEEEECCCCCCCCEEEC PDGKLYCCNNGGFNYVESNGYLAPHGIADDYSGGRIERIDIATGAVEVLYQSGDHGVVLR CCCCEEEECCCCCCEEECCCEECCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEE GPNDLMFDSHGGFWFTDHGKVDYAKRCHDIVGIFYAKADGSFIEEVIFPSYNPNGIGLSP CCCCEEEECCCCEEEECCCCCCHHHHHHHEEEEEEEECCCHHHHHHHCCCCCCCCCEECC DGSKLYAAETYTCRLTRFNIVAPGKVDDAAGPGGPGIPLYRPAGYKFFDSLAMEANGNIA CCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCEE VATIGECGISVVSPTGELVEFVATDDIFTTNIAFGGPDRQDAYITLSGTGRLVKTRWTRP EEEECCCCEEEECCCHHHEEEEECCCEEEEEEEECCCCCCCEEEEEECCCCEEEEEECCC GLPLPY CCCCCC >Mature Secondary Structure AEFELIADGLRFPEAPVVMDDGSVIVTEVAAGRITRCWPGGRKQVIATPGGGPNGLAIG CCCEEEECCCCCCCCCEEEECCCEEEEEECCCCEEEECCCCCEEEEECCCCCCCCEEEC PDGKLYCCNNGGFNYVESNGYLAPHGIADDYSGGRIERIDIATGAVEVLYQSGDHGVVLR CCCCEEEECCCCCCEEECCCEECCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEE GPNDLMFDSHGGFWFTDHGKVDYAKRCHDIVGIFYAKADGSFIEEVIFPSYNPNGIGLSP CCCCEEEECCCCEEEECCCCCCHHHHHHHEEEEEEEECCCHHHHHHHCCCCCCCCCEECC DGSKLYAAETYTCRLTRFNIVAPGKVDDAAGPGGPGIPLYRPAGYKFFDSLAMEANGNIA CCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCEE VATIGECGISVVSPTGELVEFVATDDIFTTNIAFGGPDRQDAYITLSGTGRLVKTRWTRP EEEECCCCEEEECCCHHHEEEEECCCEEEEEEEECCCCCCCEEEEEECCCCEEEEEECCC GLPLPY CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-glucono-1,5-lactone; H2O
Specific reaction: D-glucono-1,5-lactone + H2O = D-gluconate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA