Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487595

Identifier: 103487595

GI number: 103487595

Start: 2221402

End: 2221827

Strand: Direct

Name: 103487595

Synonym: Sala_2114

Alternate gene names: NA

Gene position: 2221402-2221827 (Clockwise)

Preceding gene: 103487590

Following gene: 103487596

Centisome position: 66.41

GC content: 57.98

Gene sequence:

>426_bases
GTGCGGGGTGGCGATGCAAAGCCGAATGTCGCACCCGGTGGACAGGAATATCTTGTGACCGATACATTGTGGCTGGAGGT
GGACGGAATCACCACCCAGGTGCTGACCGGCATCTATTCCGAAGAAACGCACCTGCCGCAGCCGCTGCGCATTTCGGTGC
GCGCACGGCTGGCGATCGCCGATCATTATGAGCCGACGACGCCGCTCAGTCGGTCCAAAAATTATATGCACCTGAAATTC
GCGGCGACCGAGGCCATTCCCAAGGATGTGCATTTCGTGCTGATCGAAAGCGTCGCCGATCATATCATCGACACCTTGTT
CCTGCAGGACGACAAGGTCGAGGAGGTCGAGGTCAAGATCGTCAAGCTGGCGATCGCCGAAGAAGGCGAAGAGATCGGGA
TCACCATGCGGCGGGTTCGCAAATGA

Upstream 100 bases:

>100_bases
CCGCGTCGAGCAGATCCTCGACCGCCGCCGGTTCGATGTTCGACAATGGAAGTAACTCGACCAACGCGCACCCTTTCGCT
AATGCGGCGGCGCTTTAGGG

Downstream 100 bases:

>100_bases
CGCAAAAGCTCGCTCTCGTCACGGGCGGGCTCCACCGCGTCGGCGCCGCGATTTCGGCGCGGCTCGCGCGCGAGGGCTAT
GCGCTGGCGATCCACAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Dihydroneopterin Aldolase

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MRGGDAKPNVAPGGQEYLVTDTLWLEVDGITTQVLTGIYSEETHLPQPLRISVRARLAIADHYEPTTPLSRSKNYMHLKF
AATEAIPKDVHFVLIESVADHIIDTLFLQDDKVEEVEVKIVKLAIAEEGEEIGITMRRVRK

Sequences:

>Translated_141_residues
MRGGDAKPNVAPGGQEYLVTDTLWLEVDGITTQVLTGIYSEETHLPQPLRISVRARLAIADHYEPTTPLSRSKNYMHLKF
AATEAIPKDVHFVLIESVADHIIDTLFLQDDKVEEVEVKIVKLAIAEEGEEIGITMRRVRK
>Mature_141_residues
MRGGDAKPNVAPGGQEYLVTDTLWLEVDGITTQVLTGIYSEETHLPQPLRISVRARLAIADHYEPTTPLSRSKNYMHLKF
AATEAIPKDVHFVLIESVADHIIDTLFLQDDKVEEVEVKIVKLAIAEEGEEIGITMRRVRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15820; Mature: 15820

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGGDAKPNVAPGGQEYLVTDTLWLEVDGITTQVLTGIYSEETHLPQPLRISVRARLAIA
CCCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEEEEEEEEE
DHYEPTTPLSRSKNYMHLKFAATEAIPKDVHFVLIESVADHIIDTLFLQDDKVEEVEVKI
CCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
VKLAIAEEGEEIGITMRRVRK
EEEEEECCCCCCCEEHHHHCC
>Mature Secondary Structure
MRGGDAKPNVAPGGQEYLVTDTLWLEVDGITTQVLTGIYSEETHLPQPLRISVRARLAIA
CCCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEEEEEEEEE
DHYEPTTPLSRSKNYMHLKFAATEAIPKDVHFVLIESVADHIIDTLFLQDDKVEEVEVKI
CCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
VKLAIAEEGEEIGITMRRVRK
EEEEEECCCCCCCEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA