| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is glpX [H]
Identifier: 103487588
GI number: 103487588
Start: 2213344
End: 2214315
Strand: Direct
Name: glpX [H]
Synonym: Sala_2107
Alternate gene names: 103487588
Gene position: 2213344-2214315 (Clockwise)
Preceding gene: 103487586
Following gene: 103487589
Centisome position: 66.17
GC content: 69.03
Gene sequence:
>972_bases ATGACGAACAGCGGCAGCAACCTCGACCGGGTGCTCGTGCTCGAGATGGTGCGCGTCACCGAAGCCGCGGCGATCGCCGC CGCGAAGCTGATCGGCCGCGGCGACGAAAAGGCCGCCGATGCCGCCGCGGTCGAGGCGATGCGGGGCGCCTTCAACACGC TGTACATGGACGGCACCATCGTCATCGGCGAGGGCGAGCGCGACGAAGCGCCGATGCTCTATATCGGCGAAAAGGTCGGG AATGCGCCCGGCAAGGGGCCAAAGATCGACATCGCCGTCGACCCGCTGGAGGGCACGACGATCACCGCCAAGGCCGGTCC CAACGCGCTCGCGGTGCTGGCGATCGCCGAGGAAGGCTGCCTTTTGAACGCCCCCGACGTCTATATGGACAAGCTGGCGG TCGGCCCCGGCTATTCGCCCGACATCATCGGATTCGACAAGAGCGTGCGCGAGAATGTCGCGGCGGTCGCGCGCGAAAAG GGCGTCGCGCCCGAAGAGATCATCGTGTGCGTGCTCGACCGCCCGCGTCACGAGGCAATCATCGCCGAACTGCGCGCGAT CGGCTGCGGCGTCGCGCTGATCCCCGACGGCGACGTCGCCGGGGTGATCGCGACGACCAACCCCGATACCAATATCGACC TTTACATGGGATCGGGCGGCGCGCCCGAGGGCGTGCTCGCCGCCGCGGCGCTGCGCTGCGTCGGCGGCCAGTTCAAGGGC CGCCTGCTCTTCCGCAACGACGACGAGCGGCTGCGCGCGAAAAAATGGGGAATCGAGGATCTCGACCGCGTCTATGACCT GGGCGATCTGGCCAGGGGCGACGTGATCTTCGCCGCCACCGGCGTCACCGACGGATCGCTGCTGCGCGGCGTCAAGCACC GCCGCGGCGGCGGGCTGACCACCGAAAGCGTTGTCATGCGCGCCTCGTCGGGCACGGTGCGCTGGGTGCGCGGCGAGCAT CGCGCCGGCTGA
Upstream 100 bases:
>100_bases CGGCGAATCGGGTGAAGCATTCTCGACAAGCGGGGCGGCGGGCCATATGGCGCCCACCATGCCGAACGGGCGCAGCAAGT AAAGACGGAGAGTGGTGGAG
Downstream 100 bases:
>100_bases TCGGGCGCTTCACGAAGGAGAGGACACCGTGCGCCGACGCAAGGCTTTGCCATGGCGCGTCAGCCTTGCTATCGGCGGCC GATAATGGCCAGCACAACCG
Product: fructose 1,6-bisphosphatase II
Products: NA
Alternate protein names: FBPase class 2; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 2 [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTNSGSNLDRVLVLEMVRVTEAAAIAAAKLIGRGDEKAADAAAVEAMRGAFNTLYMDGTIVIGEGERDEAPMLYIGEKVG NAPGKGPKIDIAVDPLEGTTITAKAGPNALAVLAIAEEGCLLNAPDVYMDKLAVGPGYSPDIIGFDKSVRENVAAVAREK GVAPEEIIVCVLDRPRHEAIIAELRAIGCGVALIPDGDVAGVIATTNPDTNIDLYMGSGGAPEGVLAAAALRCVGGQFKG RLLFRNDDERLRAKKWGIEDLDRVYDLGDLARGDVIFAATGVTDGSLLRGVKHRRGGGLTTESVVMRASSGTVRWVRGEH RAG
Sequences:
>Translated_323_residues MTNSGSNLDRVLVLEMVRVTEAAAIAAAKLIGRGDEKAADAAAVEAMRGAFNTLYMDGTIVIGEGERDEAPMLYIGEKVG NAPGKGPKIDIAVDPLEGTTITAKAGPNALAVLAIAEEGCLLNAPDVYMDKLAVGPGYSPDIIGFDKSVRENVAAVAREK GVAPEEIIVCVLDRPRHEAIIAELRAIGCGVALIPDGDVAGVIATTNPDTNIDLYMGSGGAPEGVLAAAALRCVGGQFKG RLLFRNDDERLRAKKWGIEDLDRVYDLGDLARGDVIFAATGVTDGSLLRGVKHRRGGGLTTESVVMRASSGTVRWVRGEH RAG >Mature_322_residues TNSGSNLDRVLVLEMVRVTEAAAIAAAKLIGRGDEKAADAAAVEAMRGAFNTLYMDGTIVIGEGERDEAPMLYIGEKVGN APGKGPKIDIAVDPLEGTTITAKAGPNALAVLAIAEEGCLLNAPDVYMDKLAVGPGYSPDIIGFDKSVRENVAAVAREKG VAPEEIIVCVLDRPRHEAIIAELRAIGCGVALIPDGDVAGVIATTNPDTNIDLYMGSGGAPEGVLAAAALRCVGGQFKGR LLFRNDDERLRAKKWGIEDLDRVYDLGDLARGDVIFAATGVTDGSLLRGVKHRRGGGLTTESVVMRASSGTVRWVRGEHR AG
Specific function: Catalyzes the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate. Can functionally substitute for the FBPase class 3 (Fbp) of B.subtilis [H]
COG id: COG1494
COG function: function code G; Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790360, Length=327, Percent_Identity=49.8470948012232, Blast_Score=281, Evalue=4e-77, Organism=Escherichia coli, GI1789298, Length=323, Percent_Identity=40.2476780185758, Blast_Score=204, Evalue=6e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004464 [H]
Pfam domain/function: PF03320 FBPase_glpX [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 33772; Mature: 33641
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSGSNLDRVLVLEMVRVTEAAAIAAAKLIGRGDEKAADAAAVEAMRGAFNTLYMDGTI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCEE VIGEGERDEAPMLYIGEKVGNAPGKGPKIDIAVDPLEGTTITAKAGPNALAVLAIAEEGC EEECCCCCCCCEEEEEHHHCCCCCCCCEEEEEEECCCCCEEEECCCCCEEEEEEEECCCC LLNAPDVYMDKLAVGPGYSPDIIGFDKSVRENVAAVAREKGVAPEEIIVCVLDRPRHEAI EECCCHHHHHHEECCCCCCCCEECCCHHHHHHHHHHHHHCCCCHHHEEEEEECCCCHHHH IAELRAIGCGVALIPDGDVAGVIATTNPDTNIDLYMGSGGAPEGVLAAAALRCVGGQFKG HHHHHHHCCCEEEECCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCC RLLFRNDDERLRAKKWGIEDLDRVYDLGDLARGDVIFAATGVTDGSLLRGVKHRRGGGLT EEEEECCHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCC TESVVMRASSGTVRWVRGEHRAG HHHEEEECCCCEEEEECCCCCCC >Mature Secondary Structure TNSGSNLDRVLVLEMVRVTEAAAIAAAKLIGRGDEKAADAAAVEAMRGAFNTLYMDGTI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCEE VIGEGERDEAPMLYIGEKVGNAPGKGPKIDIAVDPLEGTTITAKAGPNALAVLAIAEEGC EEECCCCCCCCEEEEEHHHCCCCCCCCEEEEEEECCCCCEEEECCCCCEEEEEEEECCCC LLNAPDVYMDKLAVGPGYSPDIIGFDKSVRENVAAVAREKGVAPEEIIVCVLDRPRHEAI EECCCHHHHHHEECCCCCCCCEECCCHHHHHHHHHHHHHCCCCHHHEEEEEECCCCHHHH IAELRAIGCGVALIPDGDVAGVIATTNPDTNIDLYMGSGGAPEGVLAAAALRCVGGQFKG HHHHHHHCCCEEEECCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCC RLLFRNDDERLRAKKWGIEDLDRVYDLGDLARGDVIFAATGVTDGSLLRGVKHRRGGGLT EEEEECCHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCC TESVVMRASSGTVRWVRGEHRAG HHHEEEECCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8423140; 9353933; 9384377 [H]