Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yeaZ [H]

Identifier: 103487550

GI number: 103487550

Start: 2177677

End: 2178303

Strand: Reverse

Name: yeaZ [H]

Synonym: Sala_2069

Alternate gene names: 103487550

Gene position: 2178303-2177677 (Counterclockwise)

Preceding gene: 103487551

Following gene: 103487549

Centisome position: 65.12

GC content: 73.68

Gene sequence:

>627_bases
TTGTCTGACGCGCCAACGCTCGTCATCGATTCCGCCAGCGAGGCCTGCTCGGTCGCGCTGGTGGCAGGCGGGCGCGTCGT
CGACTTTCGCCATGAGGTGATCGGGCGCGGCCACGCCGAGCGCCTCGTTCCGCTGATCGCCGAACTCGCGGACGGCGGGC
GCGCCGATGCCATCGCGATCGGCTGCGGCCCCGGCAGTTTCGCCGGCGTGCGGATCGGCGTCGCCGCGGCGCGCGCGCTC
GCGCTTGGCTGGCAGGTACCCGCGCATGGCTTTTCGACCCTCGCCCTCGTCGCGGCCGGTGCGGCCGATCCGATCGGCGA
GGCGGGCGGCGCGCTCGTCGTGATGGAGGGCGGTCACGGCCAATGGTTCGTCCAGCCCTTTGCCGCCGACCTGTCGCCGC
GCGCCGATGCGTGTTCGCTGCTTCCCGACGCGGCGGTCGCGCTGAACGATGTGCTCATCGTCGGCAATCGCGCCGAGGCC
TTCGTTGCGCGCCGCGGGTCGGGGCGCGCGCTGGCCATGCTGCCCGACGCGCGCGCATTTCTGCGCCTGCCGCGCGGCGC
GCTGACCAACCCGCCGAGCCCCATTTATGGTCGCGCGCCCGACGCCCGACCGATGAGCGGCGCATGA

Upstream 100 bases:

>100_bases
CCGAAGGTGAAGAGCAATTTCATCTCGACGCTCGGCTATGGCGATCCCGCGACGATCTTCGACCGCAGCCCGCGGCCGGA
CTTTGATCGCTTCAACCGCC

Downstream 100 bases:

>100_bases
CCGGCGCGATCCGCATCGCCACCGCGCGGGTCGGCGACGTTGCCGCGGTGATGCGCGTGATGGACGCCGCCTTCGATCCC
GCCTATGGCGAGGCGTGGAG

Product: peptidase M22, glycoprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSDAPTLVIDSASEACSVALVAGGRVVDFRHEVIGRGHAERLVPLIAELADGGRADAIAIGCGPGSFAGVRIGVAAARAL
ALGWQVPAHGFSTLALVAAGAADPIGEAGGALVVMEGGHGQWFVQPFAADLSPRADACSLLPDAAVALNDVLIVGNRAEA
FVARRGSGRALAMLPDARAFLRLPRGALTNPPSPIYGRAPDARPMSGA

Sequences:

>Translated_208_residues
MSDAPTLVIDSASEACSVALVAGGRVVDFRHEVIGRGHAERLVPLIAELADGGRADAIAIGCGPGSFAGVRIGVAAARAL
ALGWQVPAHGFSTLALVAAGAADPIGEAGGALVVMEGGHGQWFVQPFAADLSPRADACSLLPDAAVALNDVLIVGNRAEA
FVARRGSGRALAMLPDARAFLRLPRGALTNPPSPIYGRAPDARPMSGA
>Mature_207_residues
SDAPTLVIDSASEACSVALVAGGRVVDFRHEVIGRGHAERLVPLIAELADGGRADAIAIGCGPGSFAGVRIGVAAARALA
LGWQVPAHGFSTLALVAAGAADPIGEAGGALVVMEGGHGQWFVQPFAADLSPRADACSLLPDAAVALNDVLIVGNRAEAF
VARRGSGRALAMLPDARAFLRLPRGALTNPPSPIYGRAPDARPMSGA

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=100, Percent_Identity=46, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 20957; Mature: 20826

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAPTLVIDSASEACSVALVAGGRVVDFRHEVIGRGHAERLVPLIAELADGGRADAIAI
CCCCCEEEEECCCCCEEEEEEECCEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEE
GCGPGSFAGVRIGVAAARALALGWQVPAHGFSTLALVAAGAADPIGEAGGALVVMEGGHG
ECCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCC
QWFVQPFAADLSPRADACSLLPDAAVALNDVLIVGNRAEAFVARRGSGRALAMLPDARAF
EEEEEEECCCCCCCCCHHHHCCCHHHEECCEEEECCCHHEEEEECCCCCEEEECCCCHHH
LRLPRGALTNPPSPIYGRAPDARPMSGA
HHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDAPTLVIDSASEACSVALVAGGRVVDFRHEVIGRGHAERLVPLIAELADGGRADAIAI
CCCCEEEEECCCCCEEEEEEECCEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEE
GCGPGSFAGVRIGVAAARALALGWQVPAHGFSTLALVAAGAADPIGEAGGALVVMEGGHG
ECCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCC
QWFVQPFAADLSPRADACSLLPDAAVALNDVLIVGNRAEAFVARRGSGRALAMLPDARAF
EEEEEEECCCCCCCCCHHHHCCCHHHEECCEEEECCCHHEEEEECCCCCEEEECCCCHHH
LRLPRGALTNPPSPIYGRAPDARPMSGA
HHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]