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The map label for this gene is fecI [C]

Identifier: 103487541

GI number: 103487541

Start: 2170504

End: 2171373

Strand: Reverse

Name: fecI [C]

Synonym: Sala_2060

Alternate gene names: 103487541

Gene position: 2171373-2170504 (Counterclockwise)

Preceding gene: 103487542

Following gene: 103487538

Centisome position: 64.91

GC content: 69.43

Gene sequence:

>870_bases
ATGGCGGCGACGCGCTCCGGCGATGCGGCGGGCGCGGCGGGTCTTTTCGACCCGCTGCGCCCGATGCTCACGCGCGTTGC
CTATCGAATGCTGGGTTCGGTCGCCGATGCCGAGGATGTCGTGCAGGATGCCTTCATCCGCTGGCTTGGCACCGATCGCG
GTGCGGTGCGCGAGCCCGCCGCCTTCCTCCGCCGTACCGTGACGCGGCTCTGCCTCGACCAGCTCAAATCGGCGCGGGCA
CAGCGCGAAACCTATATCGGCCCCTGGCTCCCCGACCCGCTGGTCGAGGAGGACGAGGCCGACGACGATGTCACGCTGCC
GCTGATGCTCGCGCTCGAACGGCTCTCCCCCCTGGAGCGCGCGGCTTTCCTGCTCCACGACGTGTTCGGCGTCGGCTTCG
ACGAGGTCGCGGCCACGATCGACCGCGATCCCGCCGCGGCGCGCCAGCTTGCCGCGCGGGCGCGCTCCCACGTCCGCGAC
GCGCGCCCCCGCTACAAGCTCGAAAAAGCGCGGGGGCTGGAAATCGCGCGCGCCTTTTTCGAGGCATCGCGCAGCGGCGA
TATGGAGACGCTCGGCGCCCTGCTGGCCGCCGATGTCGGCATGTGGGCCGATGGCGGCGGCAAGCGCCCGGCGGCCGCGG
TCCCGATCCTCGGAAGGAAACTGGTGTTGACGGTTCAGCGCAGCATCGCGGTTCTGCTGCGCAAATATGGCTCGACGCTG
GTTCACACCGGCATCATCAACGGCCTGCCGGGCTTCGTGACGCGCGAGGCCGACGGCGAGCTTCAGACCACCGCGCTGGC
GATCGAGGACGGCAAGATCACCGGCATTTATGTCATGCGCAACCCGGACAAGCTGCGGCATGTGCATTGA

Upstream 100 bases:

>100_bases
AGGTGAAGCTGACCCTGATGATCAACATCATCAACGGCTGGAACCGGATCGCGGTCGGGTTCGACCTGTGGCTCGAAACC
CCGGCGGCCAGGGCGGCCTG

Downstream 100 bases:

>100_bases
GTCATGGCGGGCTTCGACTGATTGCGGCCAGGCGCAAATGCCCGATCCAGGATGACGAACGCCGCTACGAGGACCGCTGG
CGGGTCAAGACCTGTTCTGC

Product: RNA polymerase sigma factor SigJ

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor SigJ; Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; Sigma-; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor; ECF-Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase Sigma-70 Factor; ECF Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family Protein; Sigma Factor Sigma; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase; RNA Polymerase ECF-Type Sigma Factor; ECF-Family Protein RNA Polymerase Sigma Factor; ECF Sigma Factor; Sigma-70 Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; Sigma-70 Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; AlteRNAtive RNA Polymerase Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; RNA Polymerase Sigma-70-Like Factor; ECF Subfamily RNA Polymerase Sigma-

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MAATRSGDAAGAAGLFDPLRPMLTRVAYRMLGSVADAEDVVQDAFIRWLGTDRGAVREPAAFLRRTVTRLCLDQLKSARA
QRETYIGPWLPDPLVEEDEADDDVTLPLMLALERLSPLERAAFLLHDVFGVGFDEVAATIDRDPAAARQLAARARSHVRD
ARPRYKLEKARGLEIARAFFEASRSGDMETLGALLAADVGMWADGGGKRPAAAVPILGRKLVLTVQRSIAVLLRKYGSTL
VHTGIINGLPGFVTREADGELQTTALAIEDGKITGIYVMRNPDKLRHVH

Sequences:

>Translated_289_residues
MAATRSGDAAGAAGLFDPLRPMLTRVAYRMLGSVADAEDVVQDAFIRWLGTDRGAVREPAAFLRRTVTRLCLDQLKSARA
QRETYIGPWLPDPLVEEDEADDDVTLPLMLALERLSPLERAAFLLHDVFGVGFDEVAATIDRDPAAARQLAARARSHVRD
ARPRYKLEKARGLEIARAFFEASRSGDMETLGALLAADVGMWADGGGKRPAAAVPILGRKLVLTVQRSIAVLLRKYGSTL
VHTGIINGLPGFVTREADGELQTTALAIEDGKITGIYVMRNPDKLRHVH
>Mature_288_residues
AATRSGDAAGAAGLFDPLRPMLTRVAYRMLGSVADAEDVVQDAFIRWLGTDRGAVREPAAFLRRTVTRLCLDQLKSARAQ
RETYIGPWLPDPLVEEDEADDDVTLPLMLALERLSPLERAAFLLHDVFGVGFDEVAATIDRDPAAARQLAARARSHVRDA
RPRYKLEKARGLEIARAFFEASRSGDMETLGALLAADVGMWADGGGKRPAAAVPILGRKLVLTVQRSIAVLLRKYGSTLV
HTGIINGLPGFVTREADGELQTTALAIEDGKITGIYVMRNPDKLRHVH

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31476; Mature: 31344

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATRSGDAAGAAGLFDPLRPMLTRVAYRMLGSVADAEDVVQDAFIRWLGTDRGAVREPA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHH
AFLRRTVTRLCLDQLKSARAQRETYIGPWLPDPLVEEDEADDDVTLPLMLALERLSPLER
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHH
AAFLLHDVFGVGFDEVAATIDRDPAAARQLAARARSHVRDARPRYKLEKARGLEIARAFF
HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EASRSGDMETLGALLAADVGMWADGGGKRPAAAVPILGRKLVLTVQRSIAVLLRKYGSTL
HHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHCCHH
VHTGIINGLPGFVTREADGELQTTALAIEDGKITGIYVMRNPDKLRHVH
HHHHHHCCCCCCEEECCCCCEEEEEEEEECCCEEEEEEEECCHHHCCCC
>Mature Secondary Structure 
AATRSGDAAGAAGLFDPLRPMLTRVAYRMLGSVADAEDVVQDAFIRWLGTDRGAVREPA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHH
AFLRRTVTRLCLDQLKSARAQRETYIGPWLPDPLVEEDEADDDVTLPLMLALERLSPLER
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHH
AAFLLHDVFGVGFDEVAATIDRDPAAARQLAARARSHVRDARPRYKLEKARGLEIARAFF
HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EASRSGDMETLGALLAADVGMWADGGGKRPAAAVPILGRKLVLTVQRSIAVLLRKYGSTL
HHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHCCHH
VHTGIINGLPGFVTREADGELQTTALAIEDGKITGIYVMRNPDKLRHVH
HHHHHHCCCCCCEEECCCCCEEEEEEEEECCCEEEEEEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA