Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487538

Identifier: 103487538

GI number: 103487538

Start: 2166468

End: 2167001

Strand: Reverse

Name: 103487538

Synonym: Sala_2057

Alternate gene names: NA

Gene position: 2167001-2166468 (Counterclockwise)

Preceding gene: 103487541

Following gene: 103487537

Centisome position: 64.78

GC content: 66.48

Gene sequence:

>534_bases
ATGAAACCCCTGGCTCTTGCCGCTCTTGCCGCCGCTTCGCTCAGCCTGACCGGCTGCGGCGAAAATCTGGGCGCGGGGCA
ACAACTCAACGTCGTCAGCGGCCATGTCGTGATGGGTGCGACGCCCGACCGCCCCGCGGTCGGCTATTTCCGCGTCGAGG
GCGGCCCGCGCGACGTCGAACTGGTGGCGGTGACCGCCGACCTCGCGCAGCGCGTCGAGATGCACGAAAGTGTGCGCGAA
AACGGCATGATGGTGATGAAGCCGCTCGAACGCGCGGCCGTGCCCGCCAACGGCGAACTCGTCTTCAAACAGGGCGGCAA
GCATCTGATGATCTGGGGCATCAACGGCGCCGCGGTGCGCGCGGGCAAGCTGCCGATGGCGTTCGTCTTCACCAACAACA
ATAATGAACGCATCCTCTTCGACATGGTGATCAAGCCCGCCGAAGGCGGCGCGGGCGGCGAAGCGGCGATGGACCATGAT
GCGATGGGGCACGGACCGATGGACAAGGGCGGGGCGGACGCAGCCGCGAAGTAG

Upstream 100 bases:

>100_bases
GGTTCATGGGCGCGATATAGGTGCGCTAATCCTTGGCACAAGGGCTTTGAAGGCTTATCGGGGGGAGGAAAATGTTGCGC
TTTTACGGAGTCCTCCCGAA

Downstream 100 bases:

>100_bases
GATCATGCTGCATCCCGATGCTGTCATTGCGAGGAGCGAAGCGACGAAGCAATCTCCAGTGTGCGGTCGTCGATCATGGC
CGACGGCTGGAGATTGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKPLALAALAAASLSLTGCGENLGAGQQLNVVSGHVVMGATPDRPAVGYFRVEGGPRDVELVAVTADLAQRVEMHESVRE
NGMMVMKPLERAAVPANGELVFKQGGKHLMIWGINGAAVRAGKLPMAFVFTNNNNERILFDMVIKPAEGGAGGEAAMDHD
AMGHGPMDKGGADAAAK

Sequences:

>Translated_177_residues
MKPLALAALAAASLSLTGCGENLGAGQQLNVVSGHVVMGATPDRPAVGYFRVEGGPRDVELVAVTADLAQRVEMHESVRE
NGMMVMKPLERAAVPANGELVFKQGGKHLMIWGINGAAVRAGKLPMAFVFTNNNNERILFDMVIKPAEGGAGGEAAMDHD
AMGHGPMDKGGADAAAK
>Mature_177_residues
MKPLALAALAAASLSLTGCGENLGAGQQLNVVSGHVVMGATPDRPAVGYFRVEGGPRDVELVAVTADLAQRVEMHESVRE
NGMMVMKPLERAAVPANGELVFKQGGKHLMIWGINGAAVRAGKLPMAFVFTNNNNERILFDMVIKPAEGGAGGEAAMDHD
AMGHGPMDKGGADAAAK

Specific function: Unknown

COG id: COG2847

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18330; Mature: 18330

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLALAALAAASLSLTGCGENLGAGQQLNVVSGHVVMGATPDRPAVGYFRVEGGPRDVE
CCCHHHHHHHHHHEEEECCCCCCCCCCEEEEEECEEEECCCCCCCCEEEEEECCCCCCEE
LVAVTADLAQRVEMHESVRENGMMVMKPLERAAVPANGELVFKQGGKHLMIWGINGAAVR
EEEEEHHHHHHHHHHHHHHHCCEEEEECHHHHCCCCCCEEEEECCCCEEEEEECCCCEEE
AGKLPMAFVFTNNNNERILFDMVIKPAEGGAGGEAAMDHDAMGHGPMDKGGADAAAK
ECCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPLALAALAAASLSLTGCGENLGAGQQLNVVSGHVVMGATPDRPAVGYFRVEGGPRDVE
CCCHHHHHHHHHHEEEECCCCCCCCCCEEEEEECEEEECCCCCCCCEEEEEECCCCCCEE
LVAVTADLAQRVEMHESVRENGMMVMKPLERAAVPANGELVFKQGGKHLMIWGINGAAVR
EEEEEHHHHHHHHHHHHHHHCCEEEEECHHHHCCCCCCEEEEECCCCEEEEEECCCCEEE
AGKLPMAFVFTNNNNERILFDMVIKPAEGGAGGEAAMDHDAMGHGPMDKGGADAAAK
ECCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA