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The map label for this gene is rmuC [H]

Identifier: 103487536

GI number: 103487536

Start: 2164284

End: 2165639

Strand: Reverse

Name: rmuC [H]

Synonym: Sala_2055

Alternate gene names: 103487536

Gene position: 2165639-2164284 (Counterclockwise)

Preceding gene: 103487537

Following gene: 103487527

Centisome position: 64.74

GC content: 67.04

Gene sequence:

>1356_bases
ATGGATGGAATGTCGCTCATCATCGCCCTTGCGGCCCTTGCCATCGGCGCGTTGATCGGCTGGTTGTTCGCCGCTCGCCA
GTCGGGGGCGCTGATGGCTGAACGCGACGGGCTGGCCGAGCGGTTCAGGAGCGCCGTCACCGACCTCGCCGCCGAGACCG
AGGCGCGCCAGGCGGCGGACATCCGGCTCGCGGCGCTGCGCGCCGAGCAAGAGGCGCGCGAGGCCGCGCACGCGGCGCAG
GTGAGGCAGCTTCAGGACGCGCAGGCGGCGCTGACTGCGCAGTTTCGCGAGGTCGGGCAGGCGATGCTCGGCGAGGCGCA
GAAGGAGTTTCTGGAACGCGCCGAGGCCCGGTTCCGACAGAGCGAGGAAAGCGCGGGCCAGCATCTGAAGGCGCTGCTTC
AGCCCGTCCACGAACGGCTGGAGAAATATGAAACCGCTGTGAAGAAGGTCGAAACCGAACGGCAAAGCGCGTTCGGCATG
TTGCAGGGGCAGATCGAATCGATGCGCGCGCAGAGCGAGCGCGTGTCGAGCGAGGCGGCCAAGCTCGTCAACGCGCTCCG
CAATGCGCCGAAGGCGCGCGGGCGCTGGGGCGAACAGCAACTGCGCAACGTGCTCGAAAGCTGCGGGCTCAGCGAACATG
CCGATTTCCAGACCGAGGTCAGCGTTGCCGATGGCGACGGCGGGCGGCTGCGTCCCGACGTTGTGGTGAAGGTTCCCGGC
GGACAGAGCCTCGTCATCGACGCCAAGGTTTCGCTCAACGCCTATCAGGACGCCTTCGGCGCGGTCGACGAGGGCGAAAA
GGCGGCGCACCTTGCCGCGCATGCCGCGGCGATGAAGGCGCATGTCAACGCGCTGGGCGCCAAGGCCTATTGGAACCAGT
TCGACGACACCCCCGATTTCGTCGTGATGTTCGTCCCCGGCGAACATTTCCTCGCCGCCGCGCTCGACCATGACCACGAG
CTTTGGGACTATGCGTTCGAGCGCAAGGTGCTGCTCGCGACGCCGACCAACCTCATCGCGATCGCGCGCACCGTCGCGGC
GGTATGGCGGCAGGAAAAGCTCGCCAACCAGGCGCGCGAAATCGCGATGCTCGGCAAGGAACTTTATGCGCGCATGTCGG
TGATGGGCTCGCACATCGCGCGCGTCGGCAAAAATCTCGATCAGGCGACGGGCGCTTACAATGCCTTTGTCGGCAGTTTC
GAATCGCAGGTTTTGACGCAGGCCAAGCGTTTCGAGGCGCTCGACATCGAAACCGGCGGGCGGGAGATTCCGACGCTGCC
GGTTGCCGAACAGGCGGCGCGCCCGCTGGCGAAGCTCGCCGCGGCGCCGAGCGCGGTGAACGACGCGGGCGAATGA

Upstream 100 bases:

>100_bases
AAAAAGGAGACGGTACGCTCACCACCCCAAGGCAGACGGTCGTTCCACGCCCCGAATTAGCCCCTAGCCAAGCCCCCGGC
GTTCGTCCTATGTTCCGCGC

Downstream 100 bases:

>100_bases
ATCGCGTCGCCCCCGCCTCGCGGGAACAGGCAGAAACCCTTTTCATTGATCGTCACCCCGGCGAAGGCCGGGGTCTCGCC
GGTGCGCGAGGCTGAGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MDGMSLIIALAALAIGALIGWLFAARQSGALMAERDGLAERFRSAVTDLAAETEARQAADIRLAALRAEQEAREAAHAAQ
VRQLQDAQAALTAQFREVGQAMLGEAQKEFLERAEARFRQSEESAGQHLKALLQPVHERLEKYETAVKKVETERQSAFGM
LQGQIESMRAQSERVSSEAAKLVNALRNAPKARGRWGEQQLRNVLESCGLSEHADFQTEVSVADGDGGRLRPDVVVKVPG
GQSLVIDAKVSLNAYQDAFGAVDEGEKAAHLAAHAAAMKAHVNALGAKAYWNQFDDTPDFVVMFVPGEHFLAAALDHDHE
LWDYAFERKVLLATPTNLIAIARTVAAVWRQEKLANQAREIAMLGKELYARMSVMGSHIARVGKNLDQATGAYNAFVGSF
ESQVLTQAKRFEALDIETGGREIPTLPVAEQAARPLAKLAAAPSAVNDAGE

Sequences:

>Translated_451_residues
MDGMSLIIALAALAIGALIGWLFAARQSGALMAERDGLAERFRSAVTDLAAETEARQAADIRLAALRAEQEAREAAHAAQ
VRQLQDAQAALTAQFREVGQAMLGEAQKEFLERAEARFRQSEESAGQHLKALLQPVHERLEKYETAVKKVETERQSAFGM
LQGQIESMRAQSERVSSEAAKLVNALRNAPKARGRWGEQQLRNVLESCGLSEHADFQTEVSVADGDGGRLRPDVVVKVPG
GQSLVIDAKVSLNAYQDAFGAVDEGEKAAHLAAHAAAMKAHVNALGAKAYWNQFDDTPDFVVMFVPGEHFLAAALDHDHE
LWDYAFERKVLLATPTNLIAIARTVAAVWRQEKLANQAREIAMLGKELYARMSVMGSHIARVGKNLDQATGAYNAFVGSF
ESQVLTQAKRFEALDIETGGREIPTLPVAEQAARPLAKLAAAPSAVNDAGE
>Mature_451_residues
MDGMSLIIALAALAIGALIGWLFAARQSGALMAERDGLAERFRSAVTDLAAETEARQAADIRLAALRAEQEAREAAHAAQ
VRQLQDAQAALTAQFREVGQAMLGEAQKEFLERAEARFRQSEESAGQHLKALLQPVHERLEKYETAVKKVETERQSAFGM
LQGQIESMRAQSERVSSEAAKLVNALRNAPKARGRWGEQQLRNVLESCGLSEHADFQTEVSVADGDGGRLRPDVVVKVPG
GQSLVIDAKVSLNAYQDAFGAVDEGEKAAHLAAHAAAMKAHVNALGAKAYWNQFDDTPDFVVMFVPGEHFLAAALDHDHE
LWDYAFERKVLLATPTNLIAIARTVAAVWRQEKLANQAREIAMLGKELYARMSVMGSHIARVGKNLDQATGAYNAFVGSF
ESQVLTQAKRFEALDIETGGREIPTLPVAEQAARPLAKLAAAPSAVNDAGE

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=484, Percent_Identity=31.8181818181818, Blast_Score=197, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 48840; Mature: 48840

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGMSLIIALAALAIGALIGWLFAARQSGALMAERDGLAERFRSAVTDLAAETEARQAAD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRLAALRAEQEAREAAHAAQVRQLQDAQAALTAQFREVGQAMLGEAQKEFLERAEARFRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEESAGQHLKALLQPVHERLEKYETAVKKVETERQSAFGMLQGQIESMRAQSERVSSEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLVNALRNAPKARGRWGEQQLRNVLESCGLSEHADFQTEVSVADGDGGRLRPDVVVKVPG
HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC
GQSLVIDAKVSLNAYQDAFGAVDEGEKAAHLAAHAAAMKAHVNALGAKAYWNQFDDTPDF
CCEEEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VVMFVPGEHFLAAALDHDHELWDYAFERKVLLATPTNLIAIARTVAAVWRQEKLANQARE
EEEEECCCHHHHHHHCCCHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
IAMLGKELYARMSVMGSHIARVGKNLDQATGAYNAFVGSFESQVLTQAKRFEALDIETGG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCC
REIPTLPVAEQAARPLAKLAAAPSAVNDAGE
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDGMSLIIALAALAIGALIGWLFAARQSGALMAERDGLAERFRSAVTDLAAETEARQAAD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRLAALRAEQEAREAAHAAQVRQLQDAQAALTAQFREVGQAMLGEAQKEFLERAEARFRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEESAGQHLKALLQPVHERLEKYETAVKKVETERQSAFGMLQGQIESMRAQSERVSSEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLVNALRNAPKARGRWGEQQLRNVLESCGLSEHADFQTEVSVADGDGGRLRPDVVVKVPG
HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC
GQSLVIDAKVSLNAYQDAFGAVDEGEKAAHLAAHAAAMKAHVNALGAKAYWNQFDDTPDF
CCEEEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VVMFVPGEHFLAAALDHDHELWDYAFERKVLLATPTNLIAIARTVAAVWRQEKLANQARE
EEEEECCCHHHHHHHCCCHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
IAMLGKELYARMSVMGSHIARVGKNLDQATGAYNAFVGSFESQVLTQAKRFEALDIETGG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCC
REIPTLPVAEQAARPLAKLAAAPSAVNDAGE
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA