Definition | Sphingopyxis alaskensis RB2256, complete genome. |
---|---|
Accession | NC_008048 |
Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is 103487491
Identifier: 103487491
GI number: 103487491
Start: 2118812
End: 2119387
Strand: Direct
Name: 103487491
Synonym: Sala_2008
Alternate gene names: NA
Gene position: 2118812-2119387 (Clockwise)
Preceding gene: 103487490
Following gene: 103487492
Centisome position: 63.34
GC content: 63.02
Gene sequence:
>576_bases ATGAGCGACGACAAGATATTCATCAGCGCCAACGAACTGCTCGCCGATTCGCTGCGCCTTGGCATGCAGGTGATCGACAG CGGGTTCAAACCGACGCATCTGGTCGGCATCTGGCGCGGGGGCGCACCGGTGGGGATCGCGGTGCAGGAACTGCTCGACT ATCACGGCCAGCCCTGCGACCATATCGCGATCCGCACCTCCTCCTATCGCGGCATCGACGATCAGGACGCGCGCGTGCGC GTCTTCGCGCTCGGCTATCTCATCGACACGCTGAACCCCGACGACCGTCTGCTCATCATCGATGACGTCTTTGATTCGGG TCGCAGCATCCGTGCTTTTCTGTCTGAATTGAAGGCGCGCTGCCGCCACAATATGCCGCGCGACATCCGCATCGCGACCG TCTGGTTCAAGCCGCGCCGCAACGTCACCGACCTCCGCCCCGATTTCTTCGTCCACGAAACCGACCAGTGGCTGATCTTC CCGCACGAGATCGACGGGCTGACGGTCGACGAGATCCGCCGCCACAAACCCGAAGCGGCGATCATCCTTGGCGAAGTGGA GGCGCCGGGTGCCTGA
Upstream 100 bases:
>100_bases CCCTCGCAATCGGCGGCCAAGGCTGCCGCGATCCTCGCCTGGTTCGACAAATACCGGAAAGGCTGGACGCGGCCCGCGGC ATCGGATTAATCCCCGTGCG
Downstream 100 bases:
>100_bases CGGCTTCGCCTCGCACGAAGAGCGCGCCGCCTTCATCGCCGGTCTGCCGAAGGCCGAACTGCACCTCCATATCGAAGGCT CGCTCGAACCCGAACTGCTG
Product: phosphoribosyltransferase
Products: NA
Alternate protein names: Hypoxanthine-Guanine Phosphoribosyltransferase; Hypoxanthine Phosphoribosyltransferase
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSDDKIFISANELLADSLRLGMQVIDSGFKPTHLVGIWRGGAPVGIAVQELLDYHGQPCDHIAIRTSSYRGIDDQDARVR VFALGYLIDTLNPDDRLLIIDDVFDSGRSIRAFLSELKARCRHNMPRDIRIATVWFKPRRNVTDLRPDFFVHETDQWLIF PHEIDGLTVDEIRRHKPEAAIILGEVEAPGA
Sequences:
>Translated_191_residues MSDDKIFISANELLADSLRLGMQVIDSGFKPTHLVGIWRGGAPVGIAVQELLDYHGQPCDHIAIRTSSYRGIDDQDARVR VFALGYLIDTLNPDDRLLIIDDVFDSGRSIRAFLSELKARCRHNMPRDIRIATVWFKPRRNVTDLRPDFFVHETDQWLIF PHEIDGLTVDEIRRHKPEAAIILGEVEAPGA >Mature_190_residues SDDKIFISANELLADSLRLGMQVIDSGFKPTHLVGIWRGGAPVGIAVQELLDYHGQPCDHIAIRTSSYRGIDDQDARVRV FALGYLIDTLNPDDRLLIIDDVFDSGRSIRAFLSELKARCRHNMPRDIRIATVWFKPRRNVTDLRPDFFVHETDQWLIFP HEIDGLTVDEIRRHKPEAAIILGEVEAPGA
Specific function: Unknown
COG id: COG2236
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21655; Mature: 21524
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDKIFISANELLADSLRLGMQVIDSGFKPTHLVGIWRGGAPVGIAVQELLDYHGQPCD CCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCC HIAIRTSSYRGIDDQDARVRVFALGYLIDTLNPDDRLLIIDDVFDSGRSIRAFLSELKAR EEEEEECCCCCCCCCCCEEEEEEEEEHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH CRHNMPRDIRIATVWFKPRRNVTDLRPDFFVHETDQWLIFPHEIDGLTVDEIRRHKPEAA HHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHCCCCEE IILGEVEAPGA EEEEECCCCCC >Mature Secondary Structure SDDKIFISANELLADSLRLGMQVIDSGFKPTHLVGIWRGGAPVGIAVQELLDYHGQPCD CCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCC HIAIRTSSYRGIDDQDARVRVFALGYLIDTLNPDDRLLIIDDVFDSGRSIRAFLSELKAR EEEEEECCCCCCCCCCCEEEEEEEEEHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH CRHNMPRDIRIATVWFKPRRNVTDLRPDFFVHETDQWLIFPHEIDGLTVDEIRRHKPEAA HHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHCCCCEE IILGEVEAPGA EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA