Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487479

Identifier: 103487479

GI number: 103487479

Start: 2105680

End: 2106015

Strand: Direct

Name: 103487479

Synonym: Sala_1996

Alternate gene names: NA

Gene position: 2105680-2106015 (Clockwise)

Preceding gene: 103487469

Following gene: 103487480

Centisome position: 62.95

GC content: 61.01

Gene sequence:

>336_bases
ATGCTGATTACGACACTGGTTCTGGCTGCGATGGTCCAGTCGCCCGCCGCGACGGTCGACCGGACGCGCGCCGCTTTCAC
CAAATGCCTTCGCGACGACCTCAAACGATCGCTCGAAGCCAAGATCGAAGAGGCCGAATATGGGATGCGGCTGAAGGCGA
ACTGCGCGAATGAACGCGACGCCTTTCGCAAGGCGGTGATCGCGCTCGGCCGCGCCGCGGGCGATTCCGAAAAGGTCGCC
ACCGAGGACGCCGACTGGCAGGTCGAGGATTATCACGAGAACTTCACAGAGAAGTTCAAGGACTATAAATCGACCAACAC
GCTGCCCGGCGACTGA

Upstream 100 bases:

>100_bases
GCGCCGCCGTCGCCGACCTTGAGCAGAAAAGCGCTCCCATTTTCGATGGCCATCGTCTAATCTCCTTGAAAAATAATCAT
GCGGAATGGGGAGTCGCAGG

Downstream 100 bases:

>100_bases
TCCGCGACCGCCAGGGCTCAGGCCGCAAGGCACCGGCACCGCACGACAATTTCGTGCCGCCAGCCGCCCTCGCGCCCAAA
GCCAAAGCGTGTGCGGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MLITTLVLAAMVQSPAATVDRTRAAFTKCLRDDLKRSLEAKIEEAEYGMRLKANCANERDAFRKAVIALGRAAGDSEKVA
TEDADWQVEDYHENFTEKFKDYKSTNTLPGD

Sequences:

>Translated_111_residues
MLITTLVLAAMVQSPAATVDRTRAAFTKCLRDDLKRSLEAKIEEAEYGMRLKANCANERDAFRKAVIALGRAAGDSEKVA
TEDADWQVEDYHENFTEKFKDYKSTNTLPGD
>Mature_111_residues
MLITTLVLAAMVQSPAATVDRTRAAFTKCLRDDLKRSLEAKIEEAEYGMRLKANCANERDAFRKAVIALGRAAGDSEKVA
TEDADWQVEDYHENFTEKFKDYKSTNTLPGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12419; Mature: 12419

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLITTLVLAAMVQSPAATVDRTRAAFTKCLRDDLKRSLEAKIEEAEYGMRLKANCANERD
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHH
AFRKAVIALGRAAGDSEKVATEDADWQVEDYHENFTEKFKDYKSTNTLPGD
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLITTLVLAAMVQSPAATVDRTRAAFTKCLRDDLKRSLEAKIEEAEYGMRLKANCANERD
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHH
AFRKAVIALGRAAGDSEKVATEDADWQVEDYHENFTEKFKDYKSTNTLPGD
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA