Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487445

Identifier: 103487445

GI number: 103487445

Start: 2067614

End: 2067877

Strand: Direct

Name: 103487445

Synonym: Sala_1961

Alternate gene names: NA

Gene position: 2067614-2067877 (Clockwise)

Preceding gene: 103487432

Following gene: 103487448

Centisome position: 61.81

GC content: 67.42

Gene sequence:

>264_bases
ATGGTTCAGGTCGCAGCCGCACTCCTCTTCGCTCTTGCCGCCGGGTTGGGCATCACGGTGATTTTGGCGATGCTCAAATC
GAACGAGACCGCGATCCTGTCCGCGCTGCTGGGCGAAGGCGCCTTTCCGATCGCCGCTGCGCCCGAATCGGAACCCGTTC
CGGGAGCGGTCGCAGTACGCCGTCCGGCGAGCCGTCGCAGGCCTGTATCACGGCGCCTGGCGGTTGCCGGGGCGATGCGG
ACACAGTTCAGTCGCGCCGCCTGA

Upstream 100 bases:

>100_bases
AATAGTTGAGAACACAACAGGAACATGCAACCAGAACCCAAGCGAAACCGTCCTTTGCCGAGAATCAAGGTTTCGTTGAC
GAAAACCGGAAGGACAGATC

Downstream 100 bases:

>100_bases
GCCGGGCGGCCTTGGCATAGCTTGCCAGACCAAAGGGTAGCGTTGCCGCATAAACGGCACAGACCACCAGCAGCGTAAGC
CAGGGCACGGTGACCAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MVQVAAALLFALAAGLGITVILAMLKSNETAILSALLGEGAFPIAAAPESEPVPGAVAVRRPASRRRPVSRRLAVAGAMR
TQFSRAA

Sequences:

>Translated_87_residues
MVQVAAALLFALAAGLGITVILAMLKSNETAILSALLGEGAFPIAAAPESEPVPGAVAVRRPASRRRPVSRRLAVAGAMR
TQFSRAA
>Mature_87_residues
MVQVAAALLFALAAGLGITVILAMLKSNETAILSALLGEGAFPIAAAPESEPVPGAVAVRRPASRRRPVSRRLAVAGAMR
TQFSRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8895; Mature: 8895

Theoretical pI: Translated: 12.41; Mature: 12.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQVAAALLFALAAGLGITVILAMLKSNETAILSALLGEGAFPIAAAPESEPVPGAVAVR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEC
RPASRRRPVSRRLAVAGAMRTQFSRAA
CCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVQVAAALLFALAAGLGITVILAMLKSNETAILSALLGEGAFPIAAAPESEPVPGAVAVR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEC
RPASRRRPVSRRLAVAGAMRTQFSRAA
CCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA