| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487293
Identifier: 103487293
GI number: 103487293
Start: 1904676
End: 1906172
Strand: Direct
Name: 103487293
Synonym: Sala_1809
Alternate gene names: NA
Gene position: 1904676-1906172 (Clockwise)
Preceding gene: 103487292
Following gene: 103487295
Centisome position: 56.94
GC content: 66.33
Gene sequence:
>1497_bases ATGACTGATCCCGAACGCATTCCGGTCATCATCGGCGTCGGACAGGTCAACGACCGTCCAGCCGATCCCGACGACGGACT CGATTCGCTCGGGCTGATGGTCGCGGCGCTCAAGGTCGCCGCCGATGACGCGGGGGTGTCGCTCACCGACATCGACAGCC TGGCGATCGTCGACCAGATCAGCTTTCACCATCTCGGCAAGCTGTGCGAACCGCTCGCCGCCGCGATCGGCGCCAATCCG GCGATCAAATATCAATCCGCCGCGCCGCACGGTGACACCCCGGTGCGCCTGCTCAACGAGGCCGCGAACCGCATCGGCGC GGGCGAGGTGAAACTCGCGGCTGTCGTCGGCGGCGAAGCGCTGCGCACCGCCGCGGGCCGCGCCGCCAAGGCCGCGAGCG GCGAGGACAAGAGCTATAATGCGGTGCGCCGGGTCGCGACGCGGCGCGAGCCAAACTATGCCCAGAAGCACGGCCTCGCC GCGCCGGTCGACGTCTATCCGCTCTATGAAAACGCGACGCGCGCCGCGTGGGGACAAAGCCTTGCCGACGCCCAGCTGGA GAGCGCCGAAATCTGGTCGCGTTTTTCCGAGGTCGCGGCGGGAAATGAAGGAGCGTGGATTCGCAAACCCGCCTCGCCCG ACGACATTCTCGACGTGAACGAGCGCAACCGCCCGATCGCCTTTCCTTACTCAAAGCTGATGGTCGCCAATTCGTCGGTC AACCAGGGCGCGGGTTTTCTCGTGGCCAGTCTTGCCGAGGCGCGGCGGCGCGGCATCGCCGAGGACCGCCTCATCTATAT CGGCATGGGCGCCGCGGCGAAGGAACCGGCGAGCATCCTCGCCCGCGACCGTTACGATCACAGCGTCAGCATGGAAACGT CGATCGCGCGCACGCTCGCGCTCAATGGCATGACCGCCCACGATTTCGACTGCGTCGAGCTTTACAGCTGCTTTCCCTGC GTGCCCAAAATGGCCCGCCGCATCCTTGGCTGGCCGTTGGACCGCCCCGCCTCGGTGTTCGGCGGCCTCACCTTCGGCGG CGGCCCGATCGCCAACTATATGAGTCATGCGGTCGTCTCGATGGTCGAAAAACTGCGCAGCGAGGGCCGCTACGGCTTCC TCTTCGCCAATGGCGGCTTCGCGACCGACAATCATTGCATCGTGCTGGGGAACCAGCCGATCGCCGCCGCGAGCTTCCCG CAGGATTTCGACTATCAGGCCGAAGCCGAAGCGAAGCGCGGCCCGGTGCCCGAACTGGCCGAAGATTATGCCGGACCGGC GACGATCGAAAGCTACACGGTATTTTATGGCCGCGACGGCGAGCCCAAGGCCGGTGTCGTGGTGGCGCGCACACCCGACG GGCAGCGCACGCTGGCGCATGTCGATGTGAGCGATGCCGCGATGCTGGCGTTTTTGACCGACGGGACGCGGGAGCCGGTG GGGACCGAAGGACAGGTGGTGCAGCTTGTAGAGGGCTACGGCTGGCGAACGGCCTGA
Upstream 100 bases:
>100_bases TCCCAATTTCCGTTCGCATCGAGCGAAGTCGAGATGCCCATCGGCGCGGCGCCTGCCTGCGGTGTGTCTCGACTTCGCTC GACACTAACGGAGAATGGGA
Downstream 100 bases:
>100_bases CGCTCCCACCTTTTCCCGTTCGCATCGAGCGAAGTCGGGATGCCCATCCGTCGTGCATGACTTCGGGGCATCTCGACTTC GCTCGATGCAAACGGGAATT
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: Acetyl-Co A Synthetase; Enoyl-CoA Hydratase; Enoyl-CoA Hydratase/Isomerase; Thiolase; Enoyl-CoA Hydratase/Isomerase Family Protein
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MTDPERIPVIIGVGQVNDRPADPDDGLDSLGLMVAALKVAADDAGVSLTDIDSLAIVDQISFHHLGKLCEPLAAAIGANP AIKYQSAAPHGDTPVRLLNEAANRIGAGEVKLAAVVGGEALRTAAGRAAKAASGEDKSYNAVRRVATRREPNYAQKHGLA APVDVYPLYENATRAAWGQSLADAQLESAEIWSRFSEVAAGNEGAWIRKPASPDDILDVNERNRPIAFPYSKLMVANSSV NQGAGFLVASLAEARRRGIAEDRLIYIGMGAAAKEPASILARDRYDHSVSMETSIARTLALNGMTAHDFDCVELYSCFPC VPKMARRILGWPLDRPASVFGGLTFGGGPIANYMSHAVVSMVEKLRSEGRYGFLFANGGFATDNHCIVLGNQPIAAASFP QDFDYQAEAEAKRGPVPELAEDYAGPATIESYTVFYGRDGEPKAGVVVARTPDGQRTLAHVDVSDAAMLAFLTDGTREPV GTEGQVVQLVEGYGWRTA
Sequences:
>Translated_498_residues MTDPERIPVIIGVGQVNDRPADPDDGLDSLGLMVAALKVAADDAGVSLTDIDSLAIVDQISFHHLGKLCEPLAAAIGANP AIKYQSAAPHGDTPVRLLNEAANRIGAGEVKLAAVVGGEALRTAAGRAAKAASGEDKSYNAVRRVATRREPNYAQKHGLA APVDVYPLYENATRAAWGQSLADAQLESAEIWSRFSEVAAGNEGAWIRKPASPDDILDVNERNRPIAFPYSKLMVANSSV NQGAGFLVASLAEARRRGIAEDRLIYIGMGAAAKEPASILARDRYDHSVSMETSIARTLALNGMTAHDFDCVELYSCFPC VPKMARRILGWPLDRPASVFGGLTFGGGPIANYMSHAVVSMVEKLRSEGRYGFLFANGGFATDNHCIVLGNQPIAAASFP QDFDYQAEAEAKRGPVPELAEDYAGPATIESYTVFYGRDGEPKAGVVVARTPDGQRTLAHVDVSDAAMLAFLTDGTREPV GTEGQVVQLVEGYGWRTA >Mature_497_residues TDPERIPVIIGVGQVNDRPADPDDGLDSLGLMVAALKVAADDAGVSLTDIDSLAIVDQISFHHLGKLCEPLAAAIGANPA IKYQSAAPHGDTPVRLLNEAANRIGAGEVKLAAVVGGEALRTAAGRAAKAASGEDKSYNAVRRVATRREPNYAQKHGLAA PVDVYPLYENATRAAWGQSLADAQLESAEIWSRFSEVAAGNEGAWIRKPASPDDILDVNERNRPIAFPYSKLMVANSSVN QGAGFLVASLAEARRRGIAEDRLIYIGMGAAAKEPASILARDRYDHSVSMETSIARTLALNGMTAHDFDCVELYSCFPCV PKMARRILGWPLDRPASVFGGLTFGGGPIANYMSHAVVSMVEKLRSEGRYGFLFANGGFATDNHCIVLGNQPIAAASFPQ DFDYQAEAEAKRGPVPELAEDYAGPATIESYTVFYGRDGEPKAGVVVARTPDGQRTLAHVDVSDAAMLAFLTDGTREPVG TEGQVVQLVEGYGWRTA
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52926; Mature: 52795
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPERIPVIIGVGQVNDRPADPDDGLDSLGLMVAALKVAADDAGVSLTDIDSLAIVDQI CCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHH SFHHLGKLCEPLAAAIGANPAIKYQSAAPHGDTPVRLLNEAANRIGAGEVKLAAVVGGEA HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHH LRTAAGRAAKAASGEDKSYNAVRRVATRREPNYAQKHGLAAPVDVYPLYENATRAAWGQS HHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCEEEECCCCCHHHHHHHH LADAQLESAEIWSRFSEVAAGNEGAWIRKPASPDDILDVNERNRPIAFPYSKLMVANSSV HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEECCHHHEEEECCCC NQGAGFLVASLAEARRRGIAEDRLIYIGMGAAAKEPASILARDRYDHSVSMETSIARTLA CCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHH LNGMTAHDFDCVELYSCFPCVPKMARRILGWPLDRPASVFGGLTFGGGPIANYMSHAVVS CCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH MVEKLRSEGRYGFLFANGGFATDNHCIVLGNQPIAAASFPQDFDYQAEAEAKRGPVPELA HHHHHHHCCCEEEEEECCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCHHHCCCCCHHH EDYAGPATIESYTVFYGRDGEPKAGVVVARTPDGQRTLAHVDVSDAAMLAFLTDGTREPV HHCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCEEEEECCCHHEEEEEEECCCCCCC GTEGQVVQLVEGYGWRTA CCCCCEEEEECCCCCCCC >Mature Secondary Structure TDPERIPVIIGVGQVNDRPADPDDGLDSLGLMVAALKVAADDAGVSLTDIDSLAIVDQI CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHH SFHHLGKLCEPLAAAIGANPAIKYQSAAPHGDTPVRLLNEAANRIGAGEVKLAAVVGGEA HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHH LRTAAGRAAKAASGEDKSYNAVRRVATRREPNYAQKHGLAAPVDVYPLYENATRAAWGQS HHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCEEEECCCCCHHHHHHHH LADAQLESAEIWSRFSEVAAGNEGAWIRKPASPDDILDVNERNRPIAFPYSKLMVANSSV HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEECCHHHEEEECCCC NQGAGFLVASLAEARRRGIAEDRLIYIGMGAAAKEPASILARDRYDHSVSMETSIARTLA CCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHH LNGMTAHDFDCVELYSCFPCVPKMARRILGWPLDRPASVFGGLTFGGGPIANYMSHAVVS CCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH MVEKLRSEGRYGFLFANGGFATDNHCIVLGNQPIAAASFPQDFDYQAEAEAKRGPVPELA HHHHHHHCCCEEEEEECCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCHHHCCCCCHHH EDYAGPATIESYTVFYGRDGEPKAGVVVARTPDGQRTLAHVDVSDAAMLAFLTDGTREPV HHCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCEEEEECCCHHEEEEEEECCCCCCC GTEGQVVQLVEGYGWRTA CCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA