| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is aroK [H]
Identifier: 103487283
GI number: 103487283
Start: 1895819
End: 1896394
Strand: Direct
Name: aroK [H]
Synonym: Sala_1799
Alternate gene names: 103487283
Gene position: 1895819-1896394 (Clockwise)
Preceding gene: 103487278
Following gene: 103487284
Centisome position: 56.67
GC content: 67.36
Gene sequence:
>576_bases ATGTCGCGAAACCCGAAAAGCCCGGCCCCTGCGTCACCCGACGCCATCCCCGCGTCGATCCGCGACCGGTCGATCGTGCT CGTCGGGCTGATGGGATCGGGCAAGTCGACCGTCGGCCGCCGTCTTGCGCAGCGGCTGCGGATGCGCTTCGCCGATGCCG ACGACGAGATCGAGCGCGCCGCCGGCATGACGATTGCGGACATTTTCGCGCGCTTTGGCGAAACGCATTTCCGCGACGGC GAGCGCCGCGTCATCGCGCGCCTGCTCGGCGGCAAGCCGATGGTGCTCGCAACCGGTGGCGGCGCCTTCATCAATGACGA GACGCGCGCGCTGATCCTGAAGGACAGCCTTTGCATCTGGCTCGACGCCGACATTCCCACGCTCGTCGAGCGTGTCGGCC GCCGCAGCCACCGCCCACTGCTCAAGGATCGCGACCCCGGCGAAGTGCTGCGCGAACTGGCGGCGGTCCGTAATCCCATC TATGCCGAGGCGCATCTGCGCGTCAGTTCGGCAAGCACGCCGCACGAACATACGGTGCGGGCGATTCTGGAGGCCCTGGC AACATGGAAAAGCTGA
Upstream 100 bases:
>100_bases GATCGACCGGCGCGGAATATCGCGCGGGCTTGGTTCATCCCGTTTGGCTCGCAGCAAAACCATTGTCCCCTGCGGTCCGG GCGGTATAGCCGCGCGGACC
Downstream 100 bases:
>100_bases CCGTCGAACTGGGCGCCCGCAGCTATCCGATCCTGATCGGCGACGGGCTGATCCGCGACATTGGCGCGCATGTCGCGCCG CTGTTGAAGCGACCGCGGAC
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSRNPKSPAPASPDAIPASIRDRSIVLVGLMGSGKSTVGRRLAQRLRMRFADADDEIERAAGMTIADIFARFGETHFRDG ERRVIARLLGGKPMVLATGGGAFINDETRALILKDSLCIWLDADIPTLVERVGRRSHRPLLKDRDPGEVLRELAAVRNPI YAEAHLRVSSASTPHEHTVRAILEALATWKS
Sequences:
>Translated_191_residues MSRNPKSPAPASPDAIPASIRDRSIVLVGLMGSGKSTVGRRLAQRLRMRFADADDEIERAAGMTIADIFARFGETHFRDG ERRVIARLLGGKPMVLATGGGAFINDETRALILKDSLCIWLDADIPTLVERVGRRSHRPLLKDRDPGEVLRELAAVRNPI YAEAHLRVSSASTPHEHTVRAILEALATWKS >Mature_190_residues SRNPKSPAPASPDAIPASIRDRSIVLVGLMGSGKSTVGRRLAQRLRMRFADADDEIERAAGMTIADIFARFGETHFRDGE RRVIARLLGGKPMVLATGGGAFINDETRALILKDSLCIWLDADIPTLVERVGRRSHRPLLKDRDPGEVLRELAAVRNPIY AEAHLRVSSASTPHEHTVRAILEALATWKS
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=142, Percent_Identity=45.0704225352113, Blast_Score=114, Evalue=4e-27, Organism=Escherichia coli, GI1786587, Length=167, Percent_Identity=29.940119760479, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 20965; Mature: 20834
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNPKSPAPASPDAIPASIRDRSIVLVGLMGSGKSTVGRRLAQRLRMRFADADDEIERA CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHH AGMTIADIFARFGETHFRDGERRVIARLLGGKPMVLATGGGAFINDETRALILKDSLCIW HCCHHHHHHHHHCHHHCCCHHHHHHHHHHCCCCEEEEECCCCEECCCCEEEEEECCEEEE LDADIPTLVERVGRRSHRPLLKDRDPGEVLRELAAVRNPIYAEAHLRVSSASTPHEHTVR ECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHH AILEALATWKS HHHHHHHHCCC >Mature Secondary Structure SRNPKSPAPASPDAIPASIRDRSIVLVGLMGSGKSTVGRRLAQRLRMRFADADDEIERA CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHH AGMTIADIFARFGETHFRDGERRVIARLLGGKPMVLATGGGAFINDETRALILKDSLCIW HCCHHHHHHHHHCHHHCCCHHHHHHHHHHCCCCEEEEECCCCEECCCCEEEEEECCEEEE LDADIPTLVERVGRRSHRPLLKDRDPGEVLRELAAVRNPIYAEAHLRVSSASTPHEHTVR ECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHH AILEALATWKS HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA