Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487278

Identifier: 103487278

GI number: 103487278

Start: 1890124

End: 1890288

Strand: Direct

Name: 103487278

Synonym: Sala_1794

Alternate gene names: NA

Gene position: 1890124-1890288 (Clockwise)

Preceding gene: 103487277

Following gene: 103487283

Centisome position: 56.5

GC content: 55.15

Gene sequence:

>165_bases
ATGAAGTTCATCAAGAAGTTCGTTCGCGATACCAAAGCCGCCACCGCCATCGAATATGGCCTGATCGCGGCCCTCATCGC
CGTCGCCGGCATCTCGGCCATGGGCCTTGTTGGTAACAGCGTCAGCAACACCTTCAACGAAGTTTCGACCGAGCTGAACA
AGTAA

Upstream 100 bases:

>100_bases
GCAAAAGCCCATTAAGATTTTCAAAACCTATTCGACCTAAACCGTTCATGTTGACCCAGACCAGACCGTCAACAGGGTAA
GTGAAATCAGGAGACCAGTC

Downstream 100 bases:

>100_bases
GCTCGCGCGTCGAACACGCCGCTCCTGCGGCGTGTCGATCGAAAAGAAAGGGGCGGTGGGTCATCCCACCGCCCTTTTTC
ATGCGCCACGCCTACCGGCC

Product: Flp/Fap pilin component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 54; Mature: 54

Protein sequence:

>54_residues
MKFIKKFVRDTKAATAIEYGLIAALIAVAGISAMGLVGNSVSNTFNEVSTELNK

Sequences:

>Translated_54_residues
MKFIKKFVRDTKAATAIEYGLIAALIAVAGISAMGLVGNSVSNTFNEVSTELNK
>Mature_54_residues
MKFIKKFVRDTKAATAIEYGLIAALIAVAGISAMGLVGNSVSNTFNEVSTELNK

Specific function: Unknown

COG id: COG3847

COG function: function code U; Flp pilus assembly protein, pilin Flp

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5705; Mature: 5705

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIKKFVRDTKAATAIEYGLIAALIAVAGISAMGLVGNSVSNTFNEVSTELNK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFIKKFVRDTKAATAIEYGLIAALIAVAGISAMGLVGNSVSNTFNEVSTELNK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA