Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487270

Identifier: 103487270

GI number: 103487270

Start: 1885351

End: 1885941

Strand: Direct

Name: 103487270

Synonym: Sala_1786

Alternate gene names: NA

Gene position: 1885351-1885941 (Clockwise)

Preceding gene: 103487265

Following gene: 103487272

Centisome position: 56.36

GC content: 61.76

Gene sequence:

>591_bases
ATGGGTCAGACGACCGGGCCATCGCCCGGCAGGCGCGTCAGACCGTTCGCGGAGGTCTCAGAAGATTGTTCGGTGGGCTT
TCGGGCGCGCCAAATGCAAGCGGTGCTGCACGGCGCCGTTCGGCCAGCAGGAAGCGGTCATTCAGCATGGGCGCATATTC
GGGTCCGGCCAGGACCGAAAGCACGTCCGCAGCAAGGTGGTTGTGGGCAAGTGCGGGCCCATGATCGCTGTCATCGCACG
GGCTGGCATCGTCAGGGCTGGCATCATGTTCATGCCCGACCTCGTTTGCTGCAACCGTGTGGACATGATCATCATGGTGA
ACATGGTCTTCGGACGATTCCAGCGACTGCCCGTGTTGCCCCATATGCTCCGCCCACGCCGCCCTCGGCACAACGAGTGC
GCACAGAAGCAGAGCAAGAGCGAGAAGCCGGGTCACGTCGCAGGCATAGCGGCAGGGTTCCTGTCGATCAATTGGTGATT
ACGGCCCGCACCGTGTTCTCCATCTTGCAGTGGCCAAGAAGAATCTGGACGGCACGGAGATTGCCGGTAGCCCTGAAGAT
GATCGACGCCTTGGTTCGCCGAATCGAGTGA

Upstream 100 bases:

>100_bases
CCGCAACAGGTGTAGCAAGCGACGGGGCCAGCACACCCAGCGTGGCAGGGATGAGACAGGATGCGCAGCGCATCCACTGA
ATTGACATGATATTCTCCGC

Downstream 100 bases:

>100_bases
GTGCCGTATTAGCTTCGCCTCATGCCAACCCCGGTCACCCATTCATCAACAAGCCGAGCATATTGGCGGCTGCTAAGATG
CCCGCTGCAATCGACCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MGQTTGPSPGRRVRPFAEVSEDCSVGFRARQMQAVLHGAVRPAGSGHSAWAHIRVRPGPKARPQQGGCGQVRAHDRCHRT
GWHRQGWHHVHARPRLLQPCGHDHHGEHGLRTIPATARVAPYAPPTPPSAQRVRTEAEQEREAGSRRRHSGRVPVDQLVI
TARTVFSILQWPRRIWTARRLPVALKMIDALVRRIE

Sequences:

>Translated_196_residues
MGQTTGPSPGRRVRPFAEVSEDCSVGFRARQMQAVLHGAVRPAGSGHSAWAHIRVRPGPKARPQQGGCGQVRAHDRCHRT
GWHRQGWHHVHARPRLLQPCGHDHHGEHGLRTIPATARVAPYAPPTPPSAQRVRTEAEQEREAGSRRRHSGRVPVDQLVI
TARTVFSILQWPRRIWTARRLPVALKMIDALVRRIE
>Mature_195_residues
GQTTGPSPGRRVRPFAEVSEDCSVGFRARQMQAVLHGAVRPAGSGHSAWAHIRVRPGPKARPQQGGCGQVRAHDRCHRTG
WHRQGWHHVHARPRLLQPCGHDHHGEHGLRTIPATARVAPYAPPTPPSAQRVRTEAEQEREAGSRRRHSGRVPVDQLVIT
ARTVFSILQWPRRIWTARRLPVALKMIDALVRRIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21983; Mature: 21852

Theoretical pI: Translated: 12.30; Mature: 12.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQTTGPSPGRRVRPFAEVSEDCSVGFRARQMQAVLHGAVRPAGSGHSAWAHIRVRPGPK
CCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC
ARPQQGGCGQVRAHDRCHRTGWHRQGWHHVHARPRLLQPCGHDHHGEHGLRTIPATARVA
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEECCCCCCCC
PYAPPTPPSAQRVRTEAEQEREAGSRRRHSGRVPVDQLVITARTVFSILQWPRRIWTARR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LPVALKMIDALVRRIE
CHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GQTTGPSPGRRVRPFAEVSEDCSVGFRARQMQAVLHGAVRPAGSGHSAWAHIRVRPGPK
CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC
ARPQQGGCGQVRAHDRCHRTGWHRQGWHHVHARPRLLQPCGHDHHGEHGLRTIPATARVA
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEECCCCCCCC
PYAPPTPPSAQRVRTEAEQEREAGSRRRHSGRVPVDQLVITARTVFSILQWPRRIWTARR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LPVALKMIDALVRRIE
CHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA