| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is mtgA [H]
Identifier: 103487232
GI number: 103487232
Start: 1839761
End: 1840468
Strand: Direct
Name: mtgA [H]
Synonym: Sala_1747
Alternate gene names: 103487232
Gene position: 1839761-1840468 (Clockwise)
Preceding gene: 103487231
Following gene: 103487237
Centisome position: 55.0
GC content: 64.97
Gene sequence:
>708_bases ATGCCCACCGCGAAATCGACGAAGCGCCGCAAATCCCGATGGCTTTTCCGGCCGCTCAAATGGCTGTTATGGTTGATCGC CTTTTCGGTGCTGTGGGTGCTCGTCTATGCCGTGGTGCCGCCGCCGGTGACCTTCACGATGCTGGCCGACCGCCATGGCA TCACCAAGGACTGGACCAGCCTGTCGGACATCGACCGCAATATGGTCCGCGCGGTGATCGCGGCCGAGGACGGGAAATTC TGTAGCCACAGGGGCTTCGACACCGAAGCGATCGAAGAGGCGATCGAGCGCAACGCCAGGGGCAAGCGGCTGCGCGGCGG ATCGACGATCAGCCAGCAGACCGCGAAAAATGTCTTCCTGTGGCAGGGTAGCGGCTGGACGCGCTATGTCCGCAAGGTGC CCGAAGTCTGGTTCACCTTCCTGATCGAGACGATCTGGGGCAAGCGCCGGATCATGGAGGTTTACCTCAACGTCGCCGAG ACGGGGATCGGCACCTATGGCGTCGAGGCGGGGGCGCAGCGTTATTTCAAGCATGGCGCCGCCAAGCTGACCCCGCGCGA GGCGGCACGGATCGCCGCCATCCTGCCGCTGCCCAGGAAGCGCGAGGCCGTCAGCCCGTCGGGCTTCACGCGCCGCTATG GCAACACCATCGCCGCGCGCATCGGCCAGGTGCGGCGCGACGGGCTGGATGCGTGCGTTTATCGATAG
Upstream 100 bases:
>100_bases AGGATGGCGACGGCCCCGGCGGCGAACCGCCCAAAGCCTGACGCTCATCCCAAAGCAAACCGCCGCTTGCCGCGCGTCGG CAAGCGGCTAATGAACCATC
Downstream 100 bases:
>100_bases GGCTGCTGCGGGCGCCTTAGGAGAAGGTTGCGGAAGGCCGGAGATGTCAAAGAGCCGGGCGAAAGGCTGGCATAGCGCGG GGATGCAGGACCGCGATTTT
Product: monofunctional biosynthetic peptidoglycan transglycosylase
Products: NA
Alternate protein names: Monofunctional TGase [H]
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MPTAKSTKRRKSRWLFRPLKWLLWLIAFSVLWVLVYAVVPPPVTFTMLADRHGITKDWTSLSDIDRNMVRAVIAAEDGKF CSHRGFDTEAIEEAIERNARGKRLRGGSTISQQTAKNVFLWQGSGWTRYVRKVPEVWFTFLIETIWGKRRIMEVYLNVAE TGIGTYGVEAGAQRYFKHGAAKLTPREAARIAAILPLPRKREAVSPSGFTRRYGNTIAARIGQVRRDGLDACVYR
Sequences:
>Translated_235_residues MPTAKSTKRRKSRWLFRPLKWLLWLIAFSVLWVLVYAVVPPPVTFTMLADRHGITKDWTSLSDIDRNMVRAVIAAEDGKF CSHRGFDTEAIEEAIERNARGKRLRGGSTISQQTAKNVFLWQGSGWTRYVRKVPEVWFTFLIETIWGKRRIMEVYLNVAE TGIGTYGVEAGAQRYFKHGAAKLTPREAARIAAILPLPRKREAVSPSGFTRRYGNTIAARIGQVRRDGLDACVYR >Mature_234_residues PTAKSTKRRKSRWLFRPLKWLLWLIAFSVLWVLVYAVVPPPVTFTMLADRHGITKDWTSLSDIDRNMVRAVIAAEDGKFC SHRGFDTEAIEEAIERNARGKRLRGGSTISQQTAKNVFLWQGSGWTRYVRKVPEVWFTFLIETIWGKRRIMEVYLNVAET GIGTYGVEAGAQRYFKHGAAKLTPREAARIAAILPLPRKREAVSPSGFTRRYGNTIAARIGQVRRDGLDACVYR
Specific function: Cell wall formation [H]
COG id: COG0744
COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 51 family [H]
Homologues:
Organism=Escherichia coli, GI1789601, Length=201, Percent_Identity=47.2636815920398, Blast_Score=166, Evalue=8e-43, Organism=Escherichia coli, GI87082258, Length=155, Percent_Identity=38.7096774193548, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001264 - InterPro: IPR011812 [H]
Pfam domain/function: PF00912 Transgly [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 26801; Mature: 26670
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTAKSTKRRKSRWLFRPLKWLLWLIAFSVLWVLVYAVVPPPVTFTMLADRHGITKDWTS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH LSDIDRNMVRAVIAAEDGKFCSHRGFDTEAIEEAIERNARGKRLRGGSTISQQTAKNVFL HHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCEEE WQGSGWTRYVRKVPEVWFTFLIETIWGKRRIMEVYLNVAETGIGTYGVEAGAQRYFKHGA ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC AKLTPREAARIAAILPLPRKREAVSPSGFTRRYGNTIAARIGQVRRDGLDACVYR CCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCC >Mature Secondary Structure PTAKSTKRRKSRWLFRPLKWLLWLIAFSVLWVLVYAVVPPPVTFTMLADRHGITKDWTS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH LSDIDRNMVRAVIAAEDGKFCSHRGFDTEAIEEAIERNARGKRLRGGSTISQQTAKNVFL HHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCEEE WQGSGWTRYVRKVPEVWFTFLIETIWGKRRIMEVYLNVAETGIGTYGVEAGAQRYFKHGA ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC AKLTPREAARIAAILPLPRKREAVSPSGFTRRYGNTIAARIGQVRRDGLDACVYR CCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA