Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487203

Identifier: 103487203

GI number: 103487203

Start: 1808177

End: 1808590

Strand: Direct

Name: 103487203

Synonym: Sala_1718

Alternate gene names: NA

Gene position: 1808177-1808590 (Clockwise)

Preceding gene: 103487202

Following gene: 103487217

Centisome position: 54.05

GC content: 65.7

Gene sequence:

>414_bases
ATGAGCATCATCGAAGGCCTGATCGGCCCGATCGCCAAGCTGATCGACAAGATCATCCCCGACCCCGAAGCGCGCGACCG
CGCCAAGCTCGAATTGCTGAAACTCGAAGGCACGCAGGAAATGGAAGCAATCCGCACGCGCATGACCGCGATCGTCGCCG
AGGCGAACAGCGCCGACCCGTGGACCAGCCGCGCGCGGCCGAGCTTTCTCTACGTCATGTACGTGCTGCTGCTCTGGGCG
ATCCCGATGGGCCTGATCGCCGCGGCGCGGCCGGAGATGGCCAAGGGCATCGCCGAAGGGATGAACGCCTATCTCGCCGG
CATTCCCGAGCCGCTCTACGCGCTCTTCGGCACCGGCTATCTGGGGTATACCGCGGCGCGCGCGTGGGGGAAGGCGAAGG
GGGTGGAGAGTTAA

Upstream 100 bases:

>100_bases
AGGCCTTTCTCTATGGCTGGCTCGCTAACCGCATCGGTGAGGCGTGATGCGCGCCATTGGGCTGACTTTTACTGACCTTT
GACCACAGAGGAGAATAGAC

Downstream 100 bases:

>100_bases
AAGCCGCCCATCTGTTCCGTTTGTGTCGAGCGAAGTCGAGACACCCATCGGGGTGGCGCCTGACCGAGGGGCATCTCGAC
TTCGCTCGATGCGAACGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSIIEGLIGPIAKLIDKIIPDPEARDRAKLELLKLEGTQEMEAIRTRMTAIVAEANSADPWTSRARPSFLYVMYVLLLWA
IPMGLIAAARPEMAKGIAEGMNAYLAGIPEPLYALFGTGYLGYTAARAWGKAKGVES

Sequences:

>Translated_137_residues
MSIIEGLIGPIAKLIDKIIPDPEARDRAKLELLKLEGTQEMEAIRTRMTAIVAEANSADPWTSRARPSFLYVMYVLLLWA
IPMGLIAAARPEMAKGIAEGMNAYLAGIPEPLYALFGTGYLGYTAARAWGKAKGVES
>Mature_136_residues
SIIEGLIGPIAKLIDKIIPDPEARDRAKLELLKLEGTQEMEAIRTRMTAIVAEANSADPWTSRARPSFLYVMYVLLLWAI
PMGLIAAARPEMAKGIAEGMNAYLAGIPEPLYALFGTGYLGYTAARAWGKAKGVES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14882; Mature: 14751

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIEGLIGPIAKLIDKIIPDPEARDRAKLELLKLEGTQEMEAIRTRMTAIVAEANSADP
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
WTSRARPSFLYVMYVLLLWAIPMGLIAAARPEMAKGIAEGMNAYLAGIPEPLYALFGTGY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCH
LGYTAARAWGKAKGVES
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SIIEGLIGPIAKLIDKIIPDPEARDRAKLELLKLEGTQEMEAIRTRMTAIVAEANSADP
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
WTSRARPSFLYVMYVLLLWAIPMGLIAAARPEMAKGIAEGMNAYLAGIPEPLYALFGTGY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCH
LGYTAARAWGKAKGVES
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA