Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487187

Identifier: 103487187

GI number: 103487187

Start: 1792507

End: 1792812

Strand: Direct

Name: 103487187

Synonym: Sala_1702

Alternate gene names: NA

Gene position: 1792507-1792812 (Clockwise)

Preceding gene: 103487184

Following gene: 103487190

Centisome position: 53.58

GC content: 63.07

Gene sequence:

>306_bases
GTGACCCAAGCCCAAGGCCTGCTGTGCCCGACCTGCCGCGTAAACCTCGTCATGTCCGAACGGCAGGGGATCGAGATCGA
CTATTGTCCGCAATGCCGCGGCGTCTGGCTCGACCGCGGCGAGCTCGACAAGATCATCGAGCGCAGCGAAGCCGTCAGTG
CGCCCGCCCCCGCCCGTCCGCAGGCGGCGCCCCCGCCGCCACAATATCGCGAACCGGACTATCGCGAGCGCAGCCATGAC
GACCGCTATTATGGCAAGCCGTACAAGAAGAAGCATAAAAGCTTCCTCAGCGAATTGTTCGATTGA

Upstream 100 bases:

>100_bases
GCCCGACGCCCTTGTCGTTCGCCGCAAGAAGCATATCTGATACGGAACGCCCCGCCGCCCCGCCGCGTTGGCTTCCAGGA
GGATAGAGAAAGGACCGTTC

Downstream 100 bases:

>100_bases
TCACCATGGGGCGCGTTGTCAGGCGCGCCGCATCGCCCATATCGCGCGGCCGCCGAGCGCCGCAGCGCCGACGGTTGCCA
GCGCATAGGCGGCCAGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MTQAQGLLCPTCRVNLVMSERQGIEIDYCPQCRGVWLDRGELDKIIERSEAVSAPAPARPQAAPPPPQYREPDYRERSHD
DRYYGKPYKKKHKSFLSELFD

Sequences:

>Translated_101_residues
MTQAQGLLCPTCRVNLVMSERQGIEIDYCPQCRGVWLDRGELDKIIERSEAVSAPAPARPQAAPPPPQYREPDYRERSHD
DRYYGKPYKKKHKSFLSELFD
>Mature_100_residues
TQAQGLLCPTCRVNLVMSERQGIEIDYCPQCRGVWLDRGELDKIIERSEAVSAPAPARPQAAPPPPQYREPDYRERSHDD
RYYGKPYKKKHKSFLSELFD

Specific function: Unknown

COG id: COG3809

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11696; Mature: 11565

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAQGLLCPTCRVNLVMSERQGIEIDYCPQCRGVWLDRGELDKIIERSEAVSAPAPARP
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCC
QAAPPPPQYREPDYRERSHDDRYYGKPYKKKHKSFLSELFD
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQAQGLLCPTCRVNLVMSERQGIEIDYCPQCRGVWLDRGELDKIIERSEAVSAPAPARP
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCC
QAAPPPPQYREPDYRERSHDDRYYGKPYKKKHKSFLSELFD
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA