| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is ppnK [H]
Identifier: 103487141
GI number: 103487141
Start: 1741537
End: 1742307
Strand: Direct
Name: ppnK [H]
Synonym: Sala_1656
Alternate gene names: 103487141
Gene position: 1741537-1742307 (Clockwise)
Preceding gene: 103487140
Following gene: 103487149
Centisome position: 52.06
GC content: 66.54
Gene sequence:
>771_bases ATGTTTCGCAAGATCGCGCTTGTCGCGTCAAGTGCGCCCGCGGCCATCGAGGCCGAAGCCGAGTTGCGGCCGCTCTACGA CTTTGTCGACATCGGCGAGGCGGAGCTGCTGATCGCCCTCGGCGGCGACGGCTTTCTGCTGCACATGCTCCACCAGTTGC TCGACCAGCGCCGCAGCCTGCCCGTGTTCGGGATGAACCGCGGGACGATCGGCTTCCTGATGAACGAGTTTCGGGTCGAG GGGCTGCTCGACCGCCTTGCCGCGGCGCGCCCCTATCTGGTTCACCCGCTGTCGGGCGATATCATGACGGTCAGCGGCGA GCGCCACATCCTGCCCGCCATCAACGAGATTTCGCTGCTGCGCGAAACGCGCCAGGCGGCGAAGCTGGAGGTGATGATCA ACGAACGGACGATGCTCGAGGAACTCGCCTGCGACGGCGTGCTCGTCTCGACGCCCGCCGGATCGACGGCCTATAACCTC AGCGCCAACGGCCCGATCCTGCCGCTCGATTCGGCGATGCTGGCGCTCACCCCGATCAGCCCGTTCCGCCCGCGCCGCTG GCGCGGCGCGCTCGTCCCCGAATCGACGAGCATCCGCTTCAACGTCCGCGAGGCGGCCAAACGCCCGGTCAGCGCGGTCG CCGACCAGCGCGAAATCCGCGATGTAAAGACCGTTCTCGTCACCACCGACCGCAGCCGCCCGCTGACCCTGCTGTTCGAT CCCGACCAGGGCCTCGACGAACGCATCGCGATGGAACAATTTATCGTTTGA
Upstream 100 bases:
>100_bases CACGACTTTCATATCGAACGGCAATCCAGACCGGCGGTCGCACGCCACATGAGCGCAACGGGCGGCTGACGGGCCGCTTG CGGAGGGGGAACCGGACCAG
Downstream 100 bases:
>100_bases GGGCTTGCAAAATCGGGCAAGCGGCGGCAAAGGAGCGCCTCGCCCGCCACGGCGGGATGTTCCTCGGTAGCTCAGCGGTA GAGCAATCGACTGTTAATCG
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MFRKIALVASSAPAAIEAEAELRPLYDFVDIGEAELLIALGGDGFLLHMLHQLLDQRRSLPVFGMNRGTIGFLMNEFRVE GLLDRLAAARPYLVHPLSGDIMTVSGERHILPAINEISLLRETRQAAKLEVMINERTMLEELACDGVLVSTPAGSTAYNL SANGPILPLDSAMLALTPISPFRPRRWRGALVPESTSIRFNVREAAKRPVSAVADQREIRDVKTVLVTTDRSRPLTLLFD PDQGLDERIAMEQFIV
Sequences:
>Translated_256_residues MFRKIALVASSAPAAIEAEAELRPLYDFVDIGEAELLIALGGDGFLLHMLHQLLDQRRSLPVFGMNRGTIGFLMNEFRVE GLLDRLAAARPYLVHPLSGDIMTVSGERHILPAINEISLLRETRQAAKLEVMINERTMLEELACDGVLVSTPAGSTAYNL SANGPILPLDSAMLALTPISPFRPRRWRGALVPESTSIRFNVREAAKRPVSAVADQREIRDVKTVLVTTDRSRPLTLLFD PDQGLDERIAMEQFIV >Mature_256_residues MFRKIALVASSAPAAIEAEAELRPLYDFVDIGEAELLIALGGDGFLLHMLHQLLDQRRSLPVFGMNRGTIGFLMNEFRVE GLLDRLAAARPYLVHPLSGDIMTVSGERHILPAINEISLLRETRQAAKLEVMINERTMLEELACDGVLVSTPAGSTAYNL SANGPILPLDSAMLALTPISPFRPRRWRGALVPESTSIRFNVREAAKRPVSAVADQREIRDVKTVLVTTDRSRPLTLLFD PDQGLDERIAMEQFIV
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus [H]
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788968, Length=179, Percent_Identity=32.4022346368715, Blast_Score=67, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6325068, Length=191, Percent_Identity=30.8900523560209, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6322509, Length=209, Percent_Identity=27.7511961722488, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 [H]
Pfam domain/function: PF01513 NAD_kinase [H]
EC number: =2.7.1.23 [H]
Molecular weight: Translated: 28309; Mature: 28309
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRKIALVASSAPAAIEAEAELRPLYDFVDIGEAELLIALGGDGFLLHMLHQLLDQRRSL CCCEEEEEECCCCCEEECCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCC PVFGMNRGTIGFLMNEFRVEGLLDRLAAARPYLVHPLSGDIMTVSGERHILPAINEISLL CEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCEECCCHHHHHHH RETRQAAKLEVMINERTMLEELACDGVLVSTPAGSTAYNLSANGPILPLDSAMLALTPIS HHHHHHHEEEEEECCHHHHHHHCCCCEEEECCCCCEEEEECCCCCEEECCCCEEEEECCC PFRPRRWRGALVPESTSIRFNVREAAKRPVSAVADQREIRDVKTVLVTTDRSRPLTLLFD CCCCCCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHEEEEEEEECCCCCEEEEEC PDQGLDERIAMEQFIV CCCCHHHHHHHHHHCC >Mature Secondary Structure MFRKIALVASSAPAAIEAEAELRPLYDFVDIGEAELLIALGGDGFLLHMLHQLLDQRRSL CCCEEEEEECCCCCEEECCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCC PVFGMNRGTIGFLMNEFRVEGLLDRLAAARPYLVHPLSGDIMTVSGERHILPAINEISLL CEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCEECCCHHHHHHH RETRQAAKLEVMINERTMLEELACDGVLVSTPAGSTAYNLSANGPILPLDSAMLALTPIS HHHHHHHEEEEEECCHHHHHHHCCCCEEEECCCCCEEEEECCCCCEEECCCCEEEEECCC PFRPRRWRGALVPESTSIRFNVREAAKRPVSAVADQREIRDVKTVLVTTDRSRPLTLLFD CCCCCCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHEEEEEEEECCCCCEEEEEC PDQGLDERIAMEQFIV CCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA