Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yoaT [H]

Identifier: 103487129

GI number: 103487129

Start: 1726873

End: 1727730

Strand: Direct

Name: yoaT [H]

Synonym: Sala_1644

Alternate gene names: 103487129

Gene position: 1726873-1727730 (Clockwise)

Preceding gene: 103487128

Following gene: 103487134

Centisome position: 51.62

GC content: 63.52

Gene sequence:

>858_bases
ATGTCTGACGGCGCGCGCGGCCACAGCCGCTTCCACGCCGTTCGCTCGCGGCTCGAGGCGATGGCGGTCGAACCGGGACC
GCGCGGCTGGTTCCTCGAGTTCCTCGTCTTCGGATTCAAACAGGGGTGGGCGTGCCTGTTCGGCGGCCTGATGCTCGCGC
TGCTGCTCGGCACGCATTTCTTCTGGCCCGACGATGCGCCGCTCCACCGCTATGATGCGATCACCATCGGCGCGGTGCTG
ATCCAGCTCGCGATGCTTGCCTTCCGGCTTGAAACGCCGAAGGAGGCGCTGGTCATCCTGATCTTCCACATCGTCGGCAC
GGTGATGGAGCTGTTCAAGACCGCGGCGGGATCGTGGCAATATCCCGAGGCGAGTCTGCTTCATATCGGCGCGGTGCCGC
TGTTCTCGGGTTTCATGTATGCCGCCGTCGGCAGCTATATCGCGCGCGTATGGCGCATCTTCGACTTTCGCTACACCGGC
TATCCGCCCGCGTGGACGAGCTATGTGCTGGCAGCGGCGATCTATATCAATTTTTTCGCGCACCATTGGACCTATGACAT
CCGCTGGTTCCTCTTCGCGGCCACCGGCCTGCTCTTCTGGCGCTGTCAGGTCTGGTTCCGCCCGCTCCACGTCCACCGGC
GGATGCCCCTGCTCGTCGGCTGGGGGCTGGTCGCGCTGTTCATCTGGTTCGCCGAAAATATCGGGACGTTTGCGCGCGCC
TGGACCTATCCCAGCCAGAATGACGGCTGGCATATGGTCGGGCTGGAAAAGCTCGGCAGCTGGTATCTGCTGATGATCAT
CTCGTTCGTGCTGGTCAGTCTGGTGCAGCGGCCGAAAGGGCGGAGCACCGCTCCCTGA

Upstream 100 bases:

>100_bases
CGCGCGATCACCTTCATTTCGCTCAGCCGCCTTGCCGGTACGATTCTCGCGCAGGCGTTGCTGCTACCCGCCGCAATGCT
GATCGCATGGGTCGCCGTCC

Downstream 100 bases:

>100_bases
CCATCGCCACCGCGTAGGCGGGGGCCGCCAGCGGTTTACTCCTCAATGCCGAGCAAGGCCGACAGCGGCCCCCGCCGTCG
CGGGGGCGACGGGCTACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSDGARGHSRFHAVRSRLEAMAVEPGPRGWFLEFLVFGFKQGWACLFGGLMLALLLGTHFFWPDDAPLHRYDAITIGAVL
IQLAMLAFRLETPKEALVILIFHIVGTVMELFKTAAGSWQYPEASLLHIGAVPLFSGFMYAAVGSYIARVWRIFDFRYTG
YPPAWTSYVLAAAIYINFFAHHWTYDIRWFLFAATGLLFWRCQVWFRPLHVHRRMPLLVGWGLVALFIWFAENIGTFARA
WTYPSQNDGWHMVGLEKLGSWYLLMIISFVLVSLVQRPKGRSTAP

Sequences:

>Translated_285_residues
MSDGARGHSRFHAVRSRLEAMAVEPGPRGWFLEFLVFGFKQGWACLFGGLMLALLLGTHFFWPDDAPLHRYDAITIGAVL
IQLAMLAFRLETPKEALVILIFHIVGTVMELFKTAAGSWQYPEASLLHIGAVPLFSGFMYAAVGSYIARVWRIFDFRYTG
YPPAWTSYVLAAAIYINFFAHHWTYDIRWFLFAATGLLFWRCQVWFRPLHVHRRMPLLVGWGLVALFIWFAENIGTFARA
WTYPSQNDGWHMVGLEKLGSWYLLMIISFVLVSLVQRPKGRSTAP
>Mature_284_residues
SDGARGHSRFHAVRSRLEAMAVEPGPRGWFLEFLVFGFKQGWACLFGGLMLALLLGTHFFWPDDAPLHRYDAITIGAVLI
QLAMLAFRLETPKEALVILIFHIVGTVMELFKTAAGSWQYPEASLLHIGAVPLFSGFMYAAVGSYIARVWRIFDFRYTGY
PPAWTSYVLAAAIYINFFAHHWTYDIRWFLFAATGLLFWRCQVWFRPLHVHRRMPLLVGWGLVALFIWFAENIGTFARAW
TYPSQNDGWHMVGLEKLGSWYLLMIISFVLVSLVQRPKGRSTAP

Specific function: Unknown

COG id: COG3739

COG function: function code S; Uncharacterized integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008535 [H]

Pfam domain/function: PF05675 DUF817 [H]

EC number: NA

Molecular weight: Translated: 32645; Mature: 32514

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SDGARGHSRFHAVRSRLEAMAVEPGPRGWFLEFLVFGFKQGWACLFGGLMLALLLGTHF
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
FWPDDAPLHRYDAITIGAVLIQLAMLAFRLETPKEALVILIFHIVGTVMELFKTAAGSWQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
YPEASLLHIGAVPLFSGFMYAAVGSYIARVWRIFDFRYTGYPPAWTSYVLAAAIYINFFA
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
HHWTYDIRWFLFAATGLLFWRCQVWFRPLHVHRRMPLLVGWGLVALFIWFAENIGTFARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
WTYPSQNDGWHMVGLEKLGSWYLLMIISFVLVSLVQRPKGRSTAP
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]