Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486107

Identifier: 103486107

GI number: 103486107

Start: 625278

End: 625709

Strand: Direct

Name: 103486107

Synonym: Sala_0614

Alternate gene names: NA

Gene position: 625278-625709 (Clockwise)

Preceding gene: 103486106

Following gene: 103486111

Centisome position: 18.69

GC content: 67.82

Gene sequence:

>432_bases
ATGGACCCGAAGGCGGCGTGCATGACCGACCCCGACGCCCCCTATCACGCCCATGTCTATTATGATCCTGCCGAGAGGTC
CGCGGCCGCCGCACTGCGCGACGATTTCGGCCGCAACTCCGCGATCCTGTTCGTCGGCGCGATGGCCGACGGCGCCGCCG
GGCCGCATCCGATCGCCCAATATGAGGTGCATTTCCTCGCGCGCTCGCGCGATGCCGTTGTGGCGGCGATTGCGGCGACG
GGCCTGCGCGCGCTGGTTCATCCGCTCACCGACGACGATGTGGCCGACCACACCAGCCTGGCGCAATGGATCGGCGAACC
GGTCGATCTCGACCTGACCGTGCTCGATCCGCCGGGAGGCAATCAGGGGATCCCGCGTTTCGGGCTTTCGGACTTTCAGG
CCTCGACAGGACCGTCGGCCCCCAGCACATAG

Upstream 100 bases:

>100_bases
ATCGACCGGCTGCTGCGCGATCCGAAGGTGGCGCGCGATCTGGAAGGCGGCGACGAAGGCGATCAGGGTTGAAGCCTGCC
CGAACGGACCTGTCCGGTCG

Downstream 100 bases:

>100_bases
GCGCAGCCGAGCCGCGTTGCGTCGTCGGCGTCGGTGAGCGCAGCGACGGTACGCCAGCCGTCGGCGCGCAGGCTCGCCGC
GACCGCTGCATCGTGACCGA

Product: aromatic ring-cleaving dioxygenase-like protein

Products: NA

Alternate protein names: Dopa 4 5-Dioxygenase; Aromatic Ring-Cleaving Dioxygenase-Like Protein; DOPA-Dioxygenase-Like Protein

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MDPKAACMTDPDAPYHAHVYYDPAERSAAAALRDDFGRNSAILFVGAMADGAAGPHPIAQYEVHFLARSRDAVVAAIAAT
GLRALVHPLTDDDVADHTSLAQWIGEPVDLDLTVLDPPGGNQGIPRFGLSDFQASTGPSAPST

Sequences:

>Translated_143_residues
MDPKAACMTDPDAPYHAHVYYDPAERSAAAALRDDFGRNSAILFVGAMADGAAGPHPIAQYEVHFLARSRDAVVAAIAAT
GLRALVHPLTDDDVADHTSLAQWIGEPVDLDLTVLDPPGGNQGIPRFGLSDFQASTGPSAPST
>Mature_143_residues
MDPKAACMTDPDAPYHAHVYYDPAERSAAAALRDDFGRNSAILFVGAMADGAAGPHPIAQYEVHFLARSRDAVVAAIAAT
GLRALVHPLTDDDVADHTSLAQWIGEPVDLDLTVLDPPGGNQGIPRFGLSDFQASTGPSAPST

Specific function: Unknown

COG id: COG3805

COG function: function code Q; Aromatic ring-cleaving dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.14.99.-

Molecular weight: Translated: 14949; Mature: 14949

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPKAACMTDPDAPYHAHVYYDPAERSAAAALRDDFGRNSAILFVGAMADGAAGPHPIAQ
CCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHH
YEVHFLARSRDAVVAAIAATGLRALVHPLTDDDVADHTSLAQWIGEPVDLDLTVLDPPGG
EEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCC
NQGIPRFGLSDFQASTGPSAPST
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDPKAACMTDPDAPYHAHVYYDPAERSAAAALRDDFGRNSAILFVGAMADGAAGPHPIAQ
CCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHH
YEVHFLARSRDAVVAAIAATGLRALVHPLTDDDVADHTSLAQWIGEPVDLDLTVLDPPGG
EEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCC
NQGIPRFGLSDFQASTGPSAPST
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA