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The map label for this gene is ctb [H]

Identifier: 103486028

GI number: 103486028

Start: 550335

End: 550820

Strand: Reverse

Name: ctb [H]

Synonym: Sala_0535

Alternate gene names: 103486028

Gene position: 550820-550335 (Counterclockwise)

Preceding gene: 103486030

Following gene: 103486027

Centisome position: 16.47

GC content: 66.67

Gene sequence:

>486_bases
ATGCAACCGATCCGCGCGCACGCTCCCGCCCATCCCCACGCCGCCGCCGCGCGCGCGGCGCGCCGCGCCGATGCAAAGGT
CATCGGCATCGACGAAGCCTTTATCGCGGCATTCGTCGACGATTTTTACGCCGCGATCCGCGCCGATGCGCTGCTCGGCC
CGGTCTTTGCCGCTCGCATCGACGATTGGCCCGCGCATCTCGCCCAGATGAACCGCTTCTGGCAGTCGATCCTGCTGGCC
GCGGGCAGTTTTTCGGGCAATCCGATGGTCAAGCATCTCGCGATCCCCGGCCTCGACGACGCGCATTTCGCGCACTGGCT
CGACCTTTTCTACGCCACGCTGCACCGCCTCGCGCCGACGCCCGAAGCGGCGAAACTGGTCGGGGAGAAGGCGCGAATGA
TCGCCGAAAGCCTGCTCACCGGCATCCGCCTGCATCGCGACCGCGACGCCGATCTGTTCAGCAAAGTGGAGCTTCCCCAT
GTCTGA

Upstream 100 bases:

>100_bases
TGTGAAGGCTCAGTCGCATAAATTAAGTATATTATATATTGCTTTTTAGCTCAACCGCGATAATAAGAGGTATCTTATAT
ACCATTATTGAGTCGAACCC

Downstream 100 bases:

>100_bases
CCTTCCCGCCGTTCAGCCCGCCCGCCTGTCCAACGATCCATATGAAACCAGCGGGGTTCAGGCGGGATTTCAGCTGCCGC
GCTGGATGTGGCGCGCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: Cj-trHbP; Truncated Hb [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MQPIRAHAPAHPHAAAARAARRADAKVIGIDEAFIAAFVDDFYAAIRADALLGPVFAARIDDWPAHLAQMNRFWQSILLA
AGSFSGNPMVKHLAIPGLDDAHFAHWLDLFYATLHRLAPTPEAAKLVGEKARMIAESLLTGIRLHRDRDADLFSKVELPH
V

Sequences:

>Translated_161_residues
MQPIRAHAPAHPHAAAARAARRADAKVIGIDEAFIAAFVDDFYAAIRADALLGPVFAARIDDWPAHLAQMNRFWQSILLA
AGSFSGNPMVKHLAIPGLDDAHFAHWLDLFYATLHRLAPTPEAAKLVGEKARMIAESLLTGIRLHRDRDADLFSKVELPH
V
>Mature_161_residues
MQPIRAHAPAHPHAAAARAARRADAKVIGIDEAFIAAFVDDFYAAIRADALLGPVFAARIDDWPAHLAQMNRFWQSILLA
AGSFSGNPMVKHLAIPGLDDAHFAHWLDLFYATLHRLAPTPEAAKLVGEKARMIAESLLTGIRLHRDRDADLFSKVELPH
V

Specific function: Has been suggested to be involved in cytochrome c peroxidase or P450-like oxygen chemistry or cyanide detoxification. The high oxygen affinity of this protein suggests that it probably does not function as an oxygen transporter [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group III subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 17669; Mature: 17669

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPIRAHAPAHPHAAAARAARRADAKVIGIDEAFIAAFVDDFYAAIRADALLGPVFAARI
CCCCCCCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDWPAHLAQMNRFWQSILLAAGSFSGNPMVKHLAIPGLDDAHFAHWLDLFYATLHRLAPT
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
PEAAKLVGEKARMIAESLLTGIRLHRDRDADLFSKVELPHV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MQPIRAHAPAHPHAAAARAARRADAKVIGIDEAFIAAFVDDFYAAIRADALLGPVFAARI
CCCCCCCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDWPAHLAQMNRFWQSILLAAGSFSGNPMVKHLAIPGLDDAHFAHWLDLFYATLHRLAPT
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
PEAAKLVGEKARMIAESLLTGIRLHRDRDADLFSKVELPHV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]