Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is yfcG [H]
Identifier: 103486005
GI number: 103486005
Start: 530372
End: 531061
Strand: Reverse
Name: yfcG [H]
Synonym: Sala_0512
Alternate gene names: 103486005
Gene position: 531061-530372 (Counterclockwise)
Preceding gene: 103486006
Following gene: 103486003
Centisome position: 15.88
GC content: 65.51
Gene sequence:
>690_bases ATGGACCATCCGATCTTCGCCCGCTGGCCCGCGAAATACCCCGACCGGCTCCAGCTTTTCTCGGCTCCCACGCCCAATGG GGTGAAGGCGGGAATCATGCTGGAGGAGACGGGCCTTTCCTATGAGCCGCACCGCATCGACATCATGGCGAATGAAAGCC ATGACCCCGCCTTTCTCGCGCTCAACCCCAATGGCAAGATTCCCGCGATCTATGACCCTCAGGGGCCGGGCGGCAAGCCG CTCGCGCTGTTCGAATCGGGCGCGATCCTGATCTATCTTGCGGACAAGAGCGGGCAGTTTCTTTCGCCCGATCCGGCGGC GCGTTACGAAACGATCCAGTGGGTGATGTGGCAGATGGGCGGCGTCGGGCCGATGTTCGGCCAGCTCGGCTTTTTCCACA AATTCGCGGGCCGCGAATATGCGGACAAGCGGCCCCGCGACCGCTACGCCGCCGAATCGGCGCGGCTGCTCGGCGTGCTC GACGATCGGCTTGCGGCGCGGCCATGGGTGATGGGCGCGGATTACAGCATCGCCGACATCTCGCTGCTCGGCTGGGTGCG CAATCTGATCGGCTTTTACGACGCCGCCGAAATCGTCGGGTTCGAGCGTTTCGCGCGTGTGCAGCGCTGGCTGGACGCCG GACTGGCGCGGCCGGGCGTGCAGCGCGGGCTGGAGGTTACGGCGGGTTGA
Upstream 100 bases:
>100_bases CCGACCTCGACCCCGAGTTCAGCGAGAAGTTCCTGCGCTTTATCATCGACGAGGTGATCCGCCACCACCAGCAGGCGAAG CGCGAGCAGGGCGCATGAGC
Downstream 100 bases:
>100_bases GGGCGGGGAGTTGCCCGGATGTAAACCTATATTCCATCGTCATCCCGGCGCAGGCCGGGATCTCGCCGGTGCGGTAATCC GATAGGGTGAGATCCCGGCC
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: GST-like protein yfcG [H]
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MDHPIFARWPAKYPDRLQLFSAPTPNGVKAGIMLEETGLSYEPHRIDIMANESHDPAFLALNPNGKIPAIYDPQGPGGKP LALFESGAILIYLADKSGQFLSPDPAARYETIQWVMWQMGGVGPMFGQLGFFHKFAGREYADKRPRDRYAAESARLLGVL DDRLAARPWVMGADYSIADISLLGWVRNLIGFYDAAEIVGFERFARVQRWLDAGLARPGVQRGLEVTAG
Sequences:
>Translated_229_residues MDHPIFARWPAKYPDRLQLFSAPTPNGVKAGIMLEETGLSYEPHRIDIMANESHDPAFLALNPNGKIPAIYDPQGPGGKP LALFESGAILIYLADKSGQFLSPDPAARYETIQWVMWQMGGVGPMFGQLGFFHKFAGREYADKRPRDRYAAESARLLGVL DDRLAARPWVMGADYSIADISLLGWVRNLIGFYDAAEIVGFERFARVQRWLDAGLARPGVQRGLEVTAG >Mature_229_residues MDHPIFARWPAKYPDRLQLFSAPTPNGVKAGIMLEETGLSYEPHRIDIMANESHDPAFLALNPNGKIPAIYDPQGPGGKP LALFESGAILIYLADKSGQFLSPDPAARYETIQWVMWQMGGVGPMFGQLGFFHKFAGREYADKRPRDRYAAESARLLGVL DDRLAARPWVMGADYSIADISLLGWVRNLIGFYDAAEIVGFERFARVQRWLDAGLARPGVQRGLEVTAG
Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=211, Percent_Identity=41.2322274881517, Blast_Score=149, Evalue=1e-37, Organism=Escherichia coli, GI87082195, Length=222, Percent_Identity=41.4414414414414, Blast_Score=144, Evalue=5e-36, Organism=Escherichia coli, GI87081789, Length=174, Percent_Identity=29.8850574712644, Blast_Score=66, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324100, Length=269, Percent_Identity=28.2527881040892, Blast_Score=88, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 25379; Mature: 25379
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHPIFARWPAKYPDRLQLFSAPTPNGVKAGIMLEETGLSYEPHRIDIMANESHDPAFLA CCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEE LNPNGKIPAIYDPQGPGGKPLALFESGAILIYLADKSGQFLSPDPAARYETIQWVMWQMG ECCCCCCCEEECCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC GVGPMFGQLGFFHKFAGREYADKRPRDRYAAESARLLGVLDDRLAARPWVMGADYSIADI CCCHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHH SLLGWVRNLIGFYDAAEIVGFERFARVQRWLDAGLARPGVQRGLEVTAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEECCC >Mature Secondary Structure MDHPIFARWPAKYPDRLQLFSAPTPNGVKAGIMLEETGLSYEPHRIDIMANESHDPAFLA CCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEE LNPNGKIPAIYDPQGPGGKPLALFESGAILIYLADKSGQFLSPDPAARYETIQWVMWQMG ECCCCCCCEEECCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC GVGPMFGQLGFFHKFAGREYADKRPRDRYAAESARLLGVLDDRLAARPWVMGADYSIADI CCCHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHH SLLGWVRNLIGFYDAAEIVGFERFARVQRWLDAGLARPGVQRGLEVTAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]