Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486004

Identifier: 103486004

GI number: 103486004

Start: 529271

End: 530215

Strand: Direct

Name: 103486004

Synonym: Sala_0511

Alternate gene names: NA

Gene position: 529271-530215 (Clockwise)

Preceding gene: 103486001

Following gene: 103486007

Centisome position: 15.82

GC content: 68.25

Gene sequence:

>945_bases
ATGAACGGACGGCGATGGATCGGCTGGCTCGGCCTTTTGGCCTTCGTGATCGGCAGCGGTGGCATTCCGGGCCCGCTTGC
CGATGCGCGCGAACGGCTGCGCGACCGGATCGGCGCGCGGCTGGCCGAGCATATGGGTGCGGACAATGCGCCGAAGGCGC
CGGGAAGCGAGACGATTTCCTATGGCCGCGACCCGCTCCAGGCGCTCGACCTGTGGCGCGCGAAAAGCGCGAAGGGTCCG
GCACCGCTGATCGTCTTTGTCCATGGCGGCGGGTGGAAACGCGGCGACAAGGACAATGCGACCGGGCGCTTCAAGGCCGT
GCATTATCCCGAACAGGGCTATGCCTTTGCGTCAATCAACTATCGCCTCGTCCCCGCCGCGACGGTCGAGCAGCAGGCGG
CCGATGTCGCGGGCGCGGTCAAGGCGCTGATCGACCGCGCGGACAGCCTCGGCATCGACCGGCGGCGCATCGTGCTGATG
GGGCACAGCGCGGGCGCGCATCTGGTCGCGCTGGTCGGCACCGACCAACGCTATCTGCGCGGCGCTGGCCTGTCCTTTGC
CGACATCGCGGGCGTCATCCCGATCGACGGCGCGGCTTATGACGTCGCGGCGCAGATGCAGGACGGGCCGCCGATCATGC
AGAAAACCTACCGCCAAGCATTCGGCAGCGACCCCGTGCGACAGAAAGCGTTGTCGCCGACGCAACAGGCCGCGGCCCCC
AATGCGCGCGAGTTCCTGCTCCTCTATGTCCAGCGCGCCGACGGCGTGCGGCAGGCGAAGGCGCTCGGCGCCGCGCTCGA
AAAGGGCGGCAGCCGCGTCGAGCATGGCAGCTTTCCCGGCGAAGGGTTGAAAGGCCATGCGGAAATCAACCGCAGCCTCG
GTGATCCGGCCTATGCGCCGACGGGGTTTGTCGATGACTGGTTGAGGCGGGTGTTCGCGCGGTAG

Upstream 100 bases:

>100_bases
GGCGCGGCCTTAGCGGATTTGCGCGCGGATACAAGCGCGGCTGGCACGAAATTGCGACAATTTCGGCCTAAGCGCTGCGT
CGGAAAGCAGGAGATAGCGC

Downstream 100 bases:

>100_bases
GGGTGGGGCATGGAGGTAAAGGGGATGTGCTCTCCCTACCCCGTCATCCCGGCGAAGGCCGGGATCTCACCCTATCGGAT
TACCGCACCGGCGAGATCCC

Product: LipQ

Products: NA

Alternate protein names: Esterase; Esterase/Lipase; Alpha/Beta Hydrolase Fold-3 Domain Protein; Alpha/Beta Hydrolase Domain-Containing Protein; Esterase/Lipase-Like Protein; Esterase/Lipase/Thioesterase Family Protein; Lipase/Esterase; Carboxylesterase Family Protein; Carboxylesterase; Esterase/Lipase/Thioesterase; Alpha/Beta Hydrolase; Carboxylesterase Type B; Aylformamidase; Hydrolase; Arylformamidase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Para-Nitrobenzyl Esterase; Alpha/Beta Hydrolase Fold Family Protein; Coagulation Factor 5/8 Type Domain Protein; Alpha/Beta Hydrolase Family Protein; Conserved Domain Protein; Peptidase; Heroin Esterase

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MNGRRWIGWLGLLAFVIGSGGIPGPLADARERLRDRIGARLAEHMGADNAPKAPGSETISYGRDPLQALDLWRAKSAKGP
APLIVFVHGGGWKRGDKDNATGRFKAVHYPEQGYAFASINYRLVPAATVEQQAADVAGAVKALIDRADSLGIDRRRIVLM
GHSAGAHLVALVGTDQRYLRGAGLSFADIAGVIPIDGAAYDVAAQMQDGPPIMQKTYRQAFGSDPVRQKALSPTQQAAAP
NAREFLLLYVQRADGVRQAKALGAALEKGGSRVEHGSFPGEGLKGHAEINRSLGDPAYAPTGFVDDWLRRVFAR

Sequences:

>Translated_314_residues
MNGRRWIGWLGLLAFVIGSGGIPGPLADARERLRDRIGARLAEHMGADNAPKAPGSETISYGRDPLQALDLWRAKSAKGP
APLIVFVHGGGWKRGDKDNATGRFKAVHYPEQGYAFASINYRLVPAATVEQQAADVAGAVKALIDRADSLGIDRRRIVLM
GHSAGAHLVALVGTDQRYLRGAGLSFADIAGVIPIDGAAYDVAAQMQDGPPIMQKTYRQAFGSDPVRQKALSPTQQAAAP
NAREFLLLYVQRADGVRQAKALGAALEKGGSRVEHGSFPGEGLKGHAEINRSLGDPAYAPTGFVDDWLRRVFAR
>Mature_314_residues
MNGRRWIGWLGLLAFVIGSGGIPGPLADARERLRDRIGARLAEHMGADNAPKAPGSETISYGRDPLQALDLWRAKSAKGP
APLIVFVHGGGWKRGDKDNATGRFKAVHYPEQGYAFASINYRLVPAATVEQQAADVAGAVKALIDRADSLGIDRRRIVLM
GHSAGAHLVALVGTDQRYLRGAGLSFADIAGVIPIDGAAYDVAAQMQDGPPIMQKTYRQAFGSDPVRQKALSPTQQAAAP
NAREFLLLYVQRADGVRQAKALGAALEKGGSRVEHGSFPGEGLKGHAEINRSLGDPAYAPTGFVDDWLRRVFAR

Specific function: Unknown

COG id: COG0657

COG function: function code I; Esterase/lipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33536; Mature: 33536

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGRRWIGWLGLLAFVIGSGGIPGPLADARERLRDRIGARLAEHMGADNAPKAPGSETIS
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
YGRDPLQALDLWRAKSAKGPAPLIVFVHGGGWKRGDKDNATGRFKAVHYPEQGYAFASIN
CCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCEEEEEC
YRLVPAATVEQQAADVAGAVKALIDRADSLGIDRRRIVLMGHSAGAHLVALVGTDQRYLR
EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHH
GAGLSFADIAGVIPIDGAAYDVAAQMQDGPPIMQKTYRQAFGSDPVRQKALSPTQQAAAP
HCCCCHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHCCC
NAREFLLLYVQRADGVRQAKALGAALEKGGSRVEHGSFPGEGLKGHAEINRSLGDPAYAP
CHHHEEEEEEHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
TGFVDDWLRRVFAR
CCHHHHHHHHHHCC
>Mature Secondary Structure
MNGRRWIGWLGLLAFVIGSGGIPGPLADARERLRDRIGARLAEHMGADNAPKAPGSETIS
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
YGRDPLQALDLWRAKSAKGPAPLIVFVHGGGWKRGDKDNATGRFKAVHYPEQGYAFASIN
CCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCEEEEEC
YRLVPAATVEQQAADVAGAVKALIDRADSLGIDRRRIVLMGHSAGAHLVALVGTDQRYLR
EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHH
GAGLSFADIAGVIPIDGAAYDVAAQMQDGPPIMQKTYRQAFGSDPVRQKALSPTQQAAAP
HCCCCHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHCCC
NAREFLLLYVQRADGVRQAKALGAALEKGGSRVEHGSFPGEGLKGHAEINRSLGDPAYAP
CHHHEEEEEEHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
TGFVDDWLRRVFAR
CCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA