Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103486004
Identifier: 103486004
GI number: 103486004
Start: 529271
End: 530215
Strand: Direct
Name: 103486004
Synonym: Sala_0511
Alternate gene names: NA
Gene position: 529271-530215 (Clockwise)
Preceding gene: 103486001
Following gene: 103486007
Centisome position: 15.82
GC content: 68.25
Gene sequence:
>945_bases ATGAACGGACGGCGATGGATCGGCTGGCTCGGCCTTTTGGCCTTCGTGATCGGCAGCGGTGGCATTCCGGGCCCGCTTGC CGATGCGCGCGAACGGCTGCGCGACCGGATCGGCGCGCGGCTGGCCGAGCATATGGGTGCGGACAATGCGCCGAAGGCGC CGGGAAGCGAGACGATTTCCTATGGCCGCGACCCGCTCCAGGCGCTCGACCTGTGGCGCGCGAAAAGCGCGAAGGGTCCG GCACCGCTGATCGTCTTTGTCCATGGCGGCGGGTGGAAACGCGGCGACAAGGACAATGCGACCGGGCGCTTCAAGGCCGT GCATTATCCCGAACAGGGCTATGCCTTTGCGTCAATCAACTATCGCCTCGTCCCCGCCGCGACGGTCGAGCAGCAGGCGG CCGATGTCGCGGGCGCGGTCAAGGCGCTGATCGACCGCGCGGACAGCCTCGGCATCGACCGGCGGCGCATCGTGCTGATG GGGCACAGCGCGGGCGCGCATCTGGTCGCGCTGGTCGGCACCGACCAACGCTATCTGCGCGGCGCTGGCCTGTCCTTTGC CGACATCGCGGGCGTCATCCCGATCGACGGCGCGGCTTATGACGTCGCGGCGCAGATGCAGGACGGGCCGCCGATCATGC AGAAAACCTACCGCCAAGCATTCGGCAGCGACCCCGTGCGACAGAAAGCGTTGTCGCCGACGCAACAGGCCGCGGCCCCC AATGCGCGCGAGTTCCTGCTCCTCTATGTCCAGCGCGCCGACGGCGTGCGGCAGGCGAAGGCGCTCGGCGCCGCGCTCGA AAAGGGCGGCAGCCGCGTCGAGCATGGCAGCTTTCCCGGCGAAGGGTTGAAAGGCCATGCGGAAATCAACCGCAGCCTCG GTGATCCGGCCTATGCGCCGACGGGGTTTGTCGATGACTGGTTGAGGCGGGTGTTCGCGCGGTAG
Upstream 100 bases:
>100_bases GGCGCGGCCTTAGCGGATTTGCGCGCGGATACAAGCGCGGCTGGCACGAAATTGCGACAATTTCGGCCTAAGCGCTGCGT CGGAAAGCAGGAGATAGCGC
Downstream 100 bases:
>100_bases GGGTGGGGCATGGAGGTAAAGGGGATGTGCTCTCCCTACCCCGTCATCCCGGCGAAGGCCGGGATCTCACCCTATCGGAT TACCGCACCGGCGAGATCCC
Product: LipQ
Products: NA
Alternate protein names: Esterase; Esterase/Lipase; Alpha/Beta Hydrolase Fold-3 Domain Protein; Alpha/Beta Hydrolase Domain-Containing Protein; Esterase/Lipase-Like Protein; Esterase/Lipase/Thioesterase Family Protein; Lipase/Esterase; Carboxylesterase Family Protein; Carboxylesterase; Esterase/Lipase/Thioesterase; Alpha/Beta Hydrolase; Carboxylesterase Type B; Aylformamidase; Hydrolase; Arylformamidase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Para-Nitrobenzyl Esterase; Alpha/Beta Hydrolase Fold Family Protein; Coagulation Factor 5/8 Type Domain Protein; Alpha/Beta Hydrolase Family Protein; Conserved Domain Protein; Peptidase; Heroin Esterase
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MNGRRWIGWLGLLAFVIGSGGIPGPLADARERLRDRIGARLAEHMGADNAPKAPGSETISYGRDPLQALDLWRAKSAKGP APLIVFVHGGGWKRGDKDNATGRFKAVHYPEQGYAFASINYRLVPAATVEQQAADVAGAVKALIDRADSLGIDRRRIVLM GHSAGAHLVALVGTDQRYLRGAGLSFADIAGVIPIDGAAYDVAAQMQDGPPIMQKTYRQAFGSDPVRQKALSPTQQAAAP NAREFLLLYVQRADGVRQAKALGAALEKGGSRVEHGSFPGEGLKGHAEINRSLGDPAYAPTGFVDDWLRRVFAR
Sequences:
>Translated_314_residues MNGRRWIGWLGLLAFVIGSGGIPGPLADARERLRDRIGARLAEHMGADNAPKAPGSETISYGRDPLQALDLWRAKSAKGP APLIVFVHGGGWKRGDKDNATGRFKAVHYPEQGYAFASINYRLVPAATVEQQAADVAGAVKALIDRADSLGIDRRRIVLM GHSAGAHLVALVGTDQRYLRGAGLSFADIAGVIPIDGAAYDVAAQMQDGPPIMQKTYRQAFGSDPVRQKALSPTQQAAAP NAREFLLLYVQRADGVRQAKALGAALEKGGSRVEHGSFPGEGLKGHAEINRSLGDPAYAPTGFVDDWLRRVFAR >Mature_314_residues MNGRRWIGWLGLLAFVIGSGGIPGPLADARERLRDRIGARLAEHMGADNAPKAPGSETISYGRDPLQALDLWRAKSAKGP APLIVFVHGGGWKRGDKDNATGRFKAVHYPEQGYAFASINYRLVPAATVEQQAADVAGAVKALIDRADSLGIDRRRIVLM GHSAGAHLVALVGTDQRYLRGAGLSFADIAGVIPIDGAAYDVAAQMQDGPPIMQKTYRQAFGSDPVRQKALSPTQQAAAP NAREFLLLYVQRADGVRQAKALGAALEKGGSRVEHGSFPGEGLKGHAEINRSLGDPAYAPTGFVDDWLRRVFAR
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33536; Mature: 33536
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGRRWIGWLGLLAFVIGSGGIPGPLADARERLRDRIGARLAEHMGADNAPKAPGSETIS CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH YGRDPLQALDLWRAKSAKGPAPLIVFVHGGGWKRGDKDNATGRFKAVHYPEQGYAFASIN CCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCEEEEEC YRLVPAATVEQQAADVAGAVKALIDRADSLGIDRRRIVLMGHSAGAHLVALVGTDQRYLR EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHH GAGLSFADIAGVIPIDGAAYDVAAQMQDGPPIMQKTYRQAFGSDPVRQKALSPTQQAAAP HCCCCHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHCCC NAREFLLLYVQRADGVRQAKALGAALEKGGSRVEHGSFPGEGLKGHAEINRSLGDPAYAP CHHHEEEEEEHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC TGFVDDWLRRVFAR CCHHHHHHHHHHCC >Mature Secondary Structure MNGRRWIGWLGLLAFVIGSGGIPGPLADARERLRDRIGARLAEHMGADNAPKAPGSETIS CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH YGRDPLQALDLWRAKSAKGPAPLIVFVHGGGWKRGDKDNATGRFKAVHYPEQGYAFASIN CCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCEEEEEC YRLVPAATVEQQAADVAGAVKALIDRADSLGIDRRRIVLMGHSAGAHLVALVGTDQRYLR EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHH GAGLSFADIAGVIPIDGAAYDVAAQMQDGPPIMQKTYRQAFGSDPVRQKALSPTQQAAAP HCCCCHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHCCC NAREFLLLYVQRADGVRQAKALGAALEKGGSRVEHGSFPGEGLKGHAEINRSLGDPAYAP CHHHEEEEEEHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC TGFVDDWLRRVFAR CCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA