Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486002

Identifier: 103486002

GI number: 103486002

Start: 527209

End: 527799

Strand: Reverse

Name: 103486002

Synonym: Sala_0509

Alternate gene names: NA

Gene position: 527799-527209 (Counterclockwise)

Preceding gene: 103486003

Following gene: 103485998

Centisome position: 15.78

GC content: 66.16

Gene sequence:

>591_bases
ATGACCCGCACCATCCTTGTCCTTTATGGCAGCTATCGCCGCGACCGGCAGGGCATCAAACTCGCCAACTGGCTCGTCGA
CGCGTTCGGCGCGCGCGGCGATACCGCCGAGCTGATCGACGCCAGGGCCGCCGGCCTCCCCATGCTCGACCGCATGTATA
AGGAATATGCGAAGGGCGAAGCGCCGCCCGCGATGGCGGAGCTCGCGCACAAGATCCGCGCCGCCGACGGCTTCGTCTTT
GTCACCGGCGAATATAATTGGGGACCGCAGCCGGGATTGAAGAACCTCACCGACCATTATCTGGAGGAATGGTTCTGGCG
GCCGGCGGCGATCGCCTGTTATTCGGCCGGCCCCTTTGCGGGCGTGCGCGCGATGATGGGGTGGCGGGACATATTGGGCG
AAATGGGGATGGCGGTGATCTCCTCGATCCTGACGGTCGGGCGGATCGGCCATGCGTTCGACGGTGACGGCAAGCCGACG
GGCGACGACGGTGTGCGGCTGGAAAAGGCCTTCCCGCGCTTCGCCGACGACCTCAACTGGTGGATCGACGCGGCGAAGGC
GCAGCGCGAACGGCAGGCGCCGCCCTACTAG

Upstream 100 bases:

>100_bases
CCAGCCCCGAACGCGAGGACACGATCCTGATCCGCGATCCCTTCAGCGACTAGGACGCCACGCCCTTCCTTTCCGGCACC
GGCCGTGGCACCAAGGCGCC

Downstream 100 bases:

>100_bases
AGCGCGATGAGCCGGAGGCGACGCGGCGATCTCCAGCCATCGGTCTCGCGCACGTCCGATGGCTGGAGATTGCTTCGCTG
CGCTCGCAATGACGAGAGGT

Product: NADPH-dependent FMN reductase

Products: NA

Alternate protein names: Reductase; Flavoprotein; Flavin Reductase; Oxidoreductase; NADPH-Dependent Fmn Reductase

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTRTILVLYGSYRRDRQGIKLANWLVDAFGARGDTAELIDARAAGLPMLDRMYKEYAKGEAPPAMAELAHKIRAADGFVF
VTGEYNWGPQPGLKNLTDHYLEEWFWRPAAIACYSAGPFAGVRAMMGWRDILGEMGMAVISSILTVGRIGHAFDGDGKPT
GDDGVRLEKAFPRFADDLNWWIDAAKAQRERQAPPY

Sequences:

>Translated_196_residues
MTRTILVLYGSYRRDRQGIKLANWLVDAFGARGDTAELIDARAAGLPMLDRMYKEYAKGEAPPAMAELAHKIRAADGFVF
VTGEYNWGPQPGLKNLTDHYLEEWFWRPAAIACYSAGPFAGVRAMMGWRDILGEMGMAVISSILTVGRIGHAFDGDGKPT
GDDGVRLEKAFPRFADDLNWWIDAAKAQRERQAPPY
>Mature_195_residues
TRTILVLYGSYRRDRQGIKLANWLVDAFGARGDTAELIDARAAGLPMLDRMYKEYAKGEAPPAMAELAHKIRAADGFVFV
TGEYNWGPQPGLKNLTDHYLEEWFWRPAAIACYSAGPFAGVRAMMGWRDILGEMGMAVISSILTVGRIGHAFDGDGKPTG
DDGVRLEKAFPRFADDLNWWIDAAKAQRERQAPPY

Specific function: Unknown

COG id: COG0431

COG function: function code R; Predicted flavoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21814; Mature: 21683

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTILVLYGSYRRDRQGIKLANWLVDAFGARGDTAELIDARAAGLPMLDRMYKEYAKGE
CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCC
APPAMAELAHKIRAADGFVFVTGEYNWGPQPGLKNLTDHYLEEWFWRPAAIACYSAGPFA
CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHEEECCCCHH
GVRAMMGWRDILGEMGMAVISSILTVGRIGHAFDGDGKPTGDDGVRLEKAFPRFADDLNW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
WIDAAKAQRERQAPPY
HHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TRTILVLYGSYRRDRQGIKLANWLVDAFGARGDTAELIDARAAGLPMLDRMYKEYAKGE
CCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCC
APPAMAELAHKIRAADGFVFVTGEYNWGPQPGLKNLTDHYLEEWFWRPAAIACYSAGPFA
CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHEEECCCCHH
GVRAMMGWRDILGEMGMAVISSILTVGRIGHAFDGDGKPTGDDGVRLEKAFPRFADDLNW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
WIDAAKAQRERQAPPY
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA