Definition | Sphingopyxis alaskensis RB2256, complete genome. |
---|---|
Accession | NC_008048 |
Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is 103486002
Identifier: 103486002
GI number: 103486002
Start: 527209
End: 527799
Strand: Reverse
Name: 103486002
Synonym: Sala_0509
Alternate gene names: NA
Gene position: 527799-527209 (Counterclockwise)
Preceding gene: 103486003
Following gene: 103485998
Centisome position: 15.78
GC content: 66.16
Gene sequence:
>591_bases ATGACCCGCACCATCCTTGTCCTTTATGGCAGCTATCGCCGCGACCGGCAGGGCATCAAACTCGCCAACTGGCTCGTCGA CGCGTTCGGCGCGCGCGGCGATACCGCCGAGCTGATCGACGCCAGGGCCGCCGGCCTCCCCATGCTCGACCGCATGTATA AGGAATATGCGAAGGGCGAAGCGCCGCCCGCGATGGCGGAGCTCGCGCACAAGATCCGCGCCGCCGACGGCTTCGTCTTT GTCACCGGCGAATATAATTGGGGACCGCAGCCGGGATTGAAGAACCTCACCGACCATTATCTGGAGGAATGGTTCTGGCG GCCGGCGGCGATCGCCTGTTATTCGGCCGGCCCCTTTGCGGGCGTGCGCGCGATGATGGGGTGGCGGGACATATTGGGCG AAATGGGGATGGCGGTGATCTCCTCGATCCTGACGGTCGGGCGGATCGGCCATGCGTTCGACGGTGACGGCAAGCCGACG GGCGACGACGGTGTGCGGCTGGAAAAGGCCTTCCCGCGCTTCGCCGACGACCTCAACTGGTGGATCGACGCGGCGAAGGC GCAGCGCGAACGGCAGGCGCCGCCCTACTAG
Upstream 100 bases:
>100_bases CCAGCCCCGAACGCGAGGACACGATCCTGATCCGCGATCCCTTCAGCGACTAGGACGCCACGCCCTTCCTTTCCGGCACC GGCCGTGGCACCAAGGCGCC
Downstream 100 bases:
>100_bases AGCGCGATGAGCCGGAGGCGACGCGGCGATCTCCAGCCATCGGTCTCGCGCACGTCCGATGGCTGGAGATTGCTTCGCTG CGCTCGCAATGACGAGAGGT
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: Reductase; Flavoprotein; Flavin Reductase; Oxidoreductase; NADPH-Dependent Fmn Reductase
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTRTILVLYGSYRRDRQGIKLANWLVDAFGARGDTAELIDARAAGLPMLDRMYKEYAKGEAPPAMAELAHKIRAADGFVF VTGEYNWGPQPGLKNLTDHYLEEWFWRPAAIACYSAGPFAGVRAMMGWRDILGEMGMAVISSILTVGRIGHAFDGDGKPT GDDGVRLEKAFPRFADDLNWWIDAAKAQRERQAPPY
Sequences:
>Translated_196_residues MTRTILVLYGSYRRDRQGIKLANWLVDAFGARGDTAELIDARAAGLPMLDRMYKEYAKGEAPPAMAELAHKIRAADGFVF VTGEYNWGPQPGLKNLTDHYLEEWFWRPAAIACYSAGPFAGVRAMMGWRDILGEMGMAVISSILTVGRIGHAFDGDGKPT GDDGVRLEKAFPRFADDLNWWIDAAKAQRERQAPPY >Mature_195_residues TRTILVLYGSYRRDRQGIKLANWLVDAFGARGDTAELIDARAAGLPMLDRMYKEYAKGEAPPAMAELAHKIRAADGFVFV TGEYNWGPQPGLKNLTDHYLEEWFWRPAAIACYSAGPFAGVRAMMGWRDILGEMGMAVISSILTVGRIGHAFDGDGKPTG DDGVRLEKAFPRFADDLNWWIDAAKAQRERQAPPY
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21814; Mature: 21683
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTILVLYGSYRRDRQGIKLANWLVDAFGARGDTAELIDARAAGLPMLDRMYKEYAKGE CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCC APPAMAELAHKIRAADGFVFVTGEYNWGPQPGLKNLTDHYLEEWFWRPAAIACYSAGPFA CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHEEECCCCHH GVRAMMGWRDILGEMGMAVISSILTVGRIGHAFDGDGKPTGDDGVRLEKAFPRFADDLNW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH WIDAAKAQRERQAPPY HHHHHHHHHHCCCCCC >Mature Secondary Structure TRTILVLYGSYRRDRQGIKLANWLVDAFGARGDTAELIDARAAGLPMLDRMYKEYAKGE CCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCC APPAMAELAHKIRAADGFVFVTGEYNWGPQPGLKNLTDHYLEEWFWRPAAIACYSAGPFA CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHEEECCCCHH GVRAMMGWRDILGEMGMAVISSILTVGRIGHAFDGDGKPTGDDGVRLEKAFPRFADDLNW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH WIDAAKAQRERQAPPY HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA