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The map label for this gene is 103485995

Identifier: 103485995

GI number: 103485995

Start: 520101

End: 520604

Strand: Direct

Name: 103485995

Synonym: Sala_0502

Alternate gene names: NA

Gene position: 520101-520604 (Clockwise)

Preceding gene: 103485991

Following gene: 103485999

Centisome position: 15.55

GC content: 66.67

Gene sequence:

>504_bases
TTGATTGGAACGATGCCCAAACGCGCAGACCTGTCGGATACTTTCTGCCCCGTCGGGCGCTCGGCGGAATTGCTCGGCGA
CCGCGCGGTGCTGCTGATCCTGCGCGACCTGTTTTTTGGGCGCCGGCGGTTCGAGGCGATCGCGACGAACACGCGGCTGG
GGCCGCAGCTCGTGTCGGCGCGGCTGAAGCTGCTGGAACGGGAAGGGGTGGTCGAGCGCCACGCCTATCAGCAGCGACCG
CCACGCCACGAATATCGCCTGACCGCGAAGGGTAAAGACCTGTTCGACGTCCTCTATGCGATGCGCAACTGGGCTGAACG
CTGGGCCTATGACGAGGGTGAGACGGGGTCGGGCCCGGCCGTGCGCTATAGTCATCGCACATGCGGTGCCGACGTCGGGA
CGTCGACAGTCTGTCCCGGCTGCGGCGAGTTACTGCGCTACGGTGATCTGAAAGGGGAGCTCTCCGCAGCGCTCAGGGCC
GAGCAGGCGGCCAGGGGCGCCTAG

Upstream 100 bases:

>100_bases
CGGCTCCGATGATGACAGCTGCGGGATGGGACATGCGCGACTCTCCTCTTGCACCCGATAGTAACTATGATAATCATAGT
GACAAGTGATAATTTTCCGG

Downstream 100 bases:

>100_bases
GGTCACGCCTTTTCCAGCGTGCATTGCAGCGGGTGCTGGTTCTGCCGCGCGGCGTCCATCACCTGATTGACCTTGGTTTC
GGCGACTTCGTAGCTGAACA

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MIGTMPKRADLSDTFCPVGRSAELLGDRAVLLILRDLFFGRRRFEAIATNTRLGPQLVSARLKLLEREGVVERHAYQQRP
PRHEYRLTAKGKDLFDVLYAMRNWAERWAYDEGETGSGPAVRYSHRTCGADVGTSTVCPGCGELLRYGDLKGELSAALRA
EQAARGA

Sequences:

>Translated_167_residues
MIGTMPKRADLSDTFCPVGRSAELLGDRAVLLILRDLFFGRRRFEAIATNTRLGPQLVSARLKLLEREGVVERHAYQQRP
PRHEYRLTAKGKDLFDVLYAMRNWAERWAYDEGETGSGPAVRYSHRTCGADVGTSTVCPGCGELLRYGDLKGELSAALRA
EQAARGA
>Mature_167_residues
MIGTMPKRADLSDTFCPVGRSAELLGDRAVLLILRDLFFGRRRFEAIATNTRLGPQLVSARLKLLEREGVVERHAYQQRP
PRHEYRLTAKGKDLFDVLYAMRNWAERWAYDEGETGSGPAVRYSHRTCGADVGTSTVCPGCGELLRYGDLKGELSAALRA
EQAARGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 18584; Mature: 18584

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGTMPKRADLSDTFCPVGRSAELLGDRAVLLILRDLFFGRRRFEAIATNTRLGPQLVSA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RLKLLEREGVVERHAYQQRPPRHEYRLTAKGKDLFDVLYAMRNWAERWAYDEGETGSGPA
HHHHHHHHCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VRYSHRTCGADVGTSTVCPGCGELLRYGDLKGELSAALRAEQAARGA
EEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIGTMPKRADLSDTFCPVGRSAELLGDRAVLLILRDLFFGRRRFEAIATNTRLGPQLVSA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RLKLLEREGVVERHAYQQRPPRHEYRLTAKGKDLFDVLYAMRNWAERWAYDEGETGSGPA
HHHHHHHHCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VRYSHRTCGADVGTSTVCPGCGELLRYGDLKGELSAALRAEQAARGA
EEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]