Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485942

Identifier: 103485942

GI number: 103485942

Start: 459925

End: 460227

Strand: Direct

Name: 103485942

Synonym: Sala_0449

Alternate gene names: NA

Gene position: 459925-460227 (Clockwise)

Preceding gene: 103485936

Following gene: 103485943

Centisome position: 13.75

GC content: 61.06

Gene sequence:

>303_bases
ATGGTCAATCGACATTCGTCGCTGGTGGCCCGCAAATGGGGGCTTTTCGCGCTTTCGCTGCTCACGGGCCATCGGCACGC
TGCGCTCCGGGTCGCGAAGAAACTCCATTTTCGGCTCGCCATCTTGCGAATGTCGATCGGCCAAAGGGTCAGAACCCCCA
GCGAAGCCTCGGCGAACTCGGTGCTGCTAGGGTCAGGACCCATTAATTACCCGTTCGAGGCGTCGAAATGGCGAAGATAT
CGGGCCTTGGCGGGTGCAGCGGGTAGCATCGCTACCCGCAAGGCCGCGAAGGTCCGAGATTGA

Upstream 100 bases:

>100_bases
GCGGAACGGATGCACATCTATCTCCCGTCAGTCGTACGGCTCCGCTTGAAGCCGCAAAAGAGCCGCCTGCGCGGCGCCTG
TTTGTGTCCTTTGTGGCTTT

Downstream 100 bases:

>100_bases
AGCCATTTCGGCGTCCCTTCGGGATTTGACCGATTTTGCCCATGGCAGCGTCGAAAAGTCTTGAAATATATCCATATTCC
CGCGCCTTTTCTCCTCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MVNRHSSLVARKWGLFALSLLTGHRHAALRVAKKLHFRLAILRMSIGQRVRTPSEASANSVLLGSGPINYPFEASKWRRY
RALAGAAGSIATRKAAKVRD

Sequences:

>Translated_100_residues
MVNRHSSLVARKWGLFALSLLTGHRHAALRVAKKLHFRLAILRMSIGQRVRTPSEASANSVLLGSGPINYPFEASKWRRY
RALAGAAGSIATRKAAKVRD
>Mature_100_residues
MVNRHSSLVARKWGLFALSLLTGHRHAALRVAKKLHFRLAILRMSIGQRVRTPSEASANSVLLGSGPINYPFEASKWRRY
RALAGAAGSIATRKAAKVRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11020; Mature: 11020

Theoretical pI: Translated: 12.58; Mature: 12.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNRHSSLVARKWGLFALSLLTGHRHAALRVAKKLHFRLAILRMSIGQRVRTPSEASANS
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
VLLGSGPINYPFEASKWRRYRALAGAAGSIATRKAAKVRD
EEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MVNRHSSLVARKWGLFALSLLTGHRHAALRVAKKLHFRLAILRMSIGQRVRTPSEASANS
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
VLLGSGPINYPFEASKWRRYRALAGAAGSIATRKAAKVRD
EEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA