Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485880

Identifier: 103485880

GI number: 103485880

Start: 397236

End: 398333

Strand: Direct

Name: 103485880

Synonym: Sala_0385

Alternate gene names: NA

Gene position: 397236-398333 (Clockwise)

Preceding gene: 103485877

Following gene: 103485881

Centisome position: 11.87

GC content: 57.47

Gene sequence:

>1098_bases
ATGGCAATCTTCATCAGCCTGTCAGTCACAGACAAAACTACATCGAAACAGGATGCGGCAACCGTGCGCACGGCGTTGCT
GGAGGAAGCTGTCGGGGCCCTTCAACCAATTTTCGGTGCACGCGGAGCATCTGCTACCCGTATTCAGGCTGTTCTTGGTC
GCTCGCCGGACAAAGATGCGACATTCAGCCTGTCGGTGCATTTGCATTTGCCGGGCCAGAGGATCGTGGCCGTTCACAGT
AAGGGAGACGATCTGCGTTCATTGGCCAGGGACGTCATCGACAAGCTAACATCTGCTACTCGCAGGCATTTGGAAAGACT
GGCCCATGGTTCCGAATTCGCCCGCAAAAGGCGGCGCGAGCGTCTCTACGAGATCACGACCGGGGCCGATCAGCGTCCTG
AAAGGGAGCGCAGCCTGGTAGAGGCGAGACTGGCCGAAATCCGGCCCAAGTTGGAAACAGCTGCCAGGCGTGAATTGGCC
TATCTGCGTGCCGTGAGCAAACTTCCAACCGGCTATCCTGAAGCCGCCGATATCGTTGACGAAGCCATCATGCGCGTCAT
TGCGAGCGATCATGGGGTCGTGGATGCCGGGGAATTAAAGATTGCCGCCTTGCGCGAACTCTTCGCGGTGATCGACGCGG
AAATCGCCGCTCAGCAGATTTCGATGTCGGCTATACCGCTAGACAGCGAAGTGCCTCAAGATGCAGAAGATGAAGCGGAG
GCTATGGTCGAAGAGGAATTTTACGAATTCTATCAGCCCGACGACCATGTCACTTTGGCCGATGTCCTGCCAGTTGAGCT
CTCGCAGACCAAAGTCGCGCTCGATGAGATGCACGTTGCAGGCGTGGTCGCGGCTCTGCGCGACCTGCCGAATCTCTGGC
GCAGGGTGTTCGTCTTGCGCCAGCAAGATCTCTTCGCACCGAAGCAGGTTTCGGAAGTGGTCGACCGCGCGCTCGATGAG
ATTGAAGATATTTTCGAAAAGGTATCCGCCTTTCTGGATGCGCGCCTCGCCGAGTGGGGTGCCGACTCGTGGGAAGAAAT
TTTCCGAAGCAAAGGTTGCCGCTGCTGCCGTCAGGCACCGATGCGTACCGGGGTATGA

Upstream 100 bases:

>100_bases
GCAAGCAAGAGCCCTGGAAGCATTCCCCCGCCGGTTGCTCCTTGCAGGCGATCGCGCCAGACAACAGCGTGCACAACACC
TCATCGCAGGATAAGAGCGC

Downstream 100 bases:

>100_bases
ACATTCCTGAAACTACGTCGTTTAGCTGGATGATATTTTCAATCGCGGTGATCGCTGCGATTGCCACGGCCAGCCACGCG
ATCATCCACAAGCGCGACCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MAIFISLSVTDKTTSKQDAATVRTALLEEAVGALQPIFGARGASATRIQAVLGRSPDKDATFSLSVHLHLPGQRIVAVHS
KGDDLRSLARDVIDKLTSATRRHLERLAHGSEFARKRRRERLYEITTGADQRPERERSLVEARLAEIRPKLETAARRELA
YLRAVSKLPTGYPEAADIVDEAIMRVIASDHGVVDAGELKIAALRELFAVIDAEIAAQQISMSAIPLDSEVPQDAEDEAE
AMVEEEFYEFYQPDDHVTLADVLPVELSQTKVALDEMHVAGVVAALRDLPNLWRRVFVLRQQDLFAPKQVSEVVDRALDE
IEDIFEKVSAFLDARLAEWGADSWEEIFRSKGCRCCRQAPMRTGV

Sequences:

>Translated_365_residues
MAIFISLSVTDKTTSKQDAATVRTALLEEAVGALQPIFGARGASATRIQAVLGRSPDKDATFSLSVHLHLPGQRIVAVHS
KGDDLRSLARDVIDKLTSATRRHLERLAHGSEFARKRRRERLYEITTGADQRPERERSLVEARLAEIRPKLETAARRELA
YLRAVSKLPTGYPEAADIVDEAIMRVIASDHGVVDAGELKIAALRELFAVIDAEIAAQQISMSAIPLDSEVPQDAEDEAE
AMVEEEFYEFYQPDDHVTLADVLPVELSQTKVALDEMHVAGVVAALRDLPNLWRRVFVLRQQDLFAPKQVSEVVDRALDE
IEDIFEKVSAFLDARLAEWGADSWEEIFRSKGCRCCRQAPMRTGV
>Mature_364_residues
AIFISLSVTDKTTSKQDAATVRTALLEEAVGALQPIFGARGASATRIQAVLGRSPDKDATFSLSVHLHLPGQRIVAVHSK
GDDLRSLARDVIDKLTSATRRHLERLAHGSEFARKRRRERLYEITTGADQRPERERSLVEARLAEIRPKLETAARRELAY
LRAVSKLPTGYPEAADIVDEAIMRVIASDHGVVDAGELKIAALRELFAVIDAEIAAQQISMSAIPLDSEVPQDAEDEAEA
MVEEEFYEFYQPDDHVTLADVLPVELSQTKVALDEMHVAGVVAALRDLPNLWRRVFVLRQQDLFAPKQVSEVVDRALDEI
EDIFEKVSAFLDARLAEWGADSWEEIFRSKGCRCCRQAPMRTGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40606; Mature: 40474

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFISLSVTDKTTSKQDAATVRTALLEEAVGALQPIFGARGASATRIQAVLGRSPDKDA
CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
TFSLSVHLHLPGQRIVAVHSKGDDLRSLARDVIDKLTSATRRHLERLAHGSEFARKRRRE
EEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RLYEITTGADQRPERERSLVEARLAEIRPKLETAARRELAYLRAVSKLPTGYPEAADIVD
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EAIMRVIASDHGVVDAGELKIAALRELFAVIDAEIAAQQISMSAIPLDSEVPQDAEDEAE
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
AMVEEEFYEFYQPDDHVTLADVLPVELSQTKVALDEMHVAGVVAALRDLPNLWRRVFVLR
HHHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQDLFAPKQVSEVVDRALDEIEDIFEKVSAFLDARLAEWGADSWEEIFRSKGCRCCRQAP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHCC
MRTGV
CCCCC
>Mature Secondary Structure 
AIFISLSVTDKTTSKQDAATVRTALLEEAVGALQPIFGARGASATRIQAVLGRSPDKDA
EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
TFSLSVHLHLPGQRIVAVHSKGDDLRSLARDVIDKLTSATRRHLERLAHGSEFARKRRRE
EEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RLYEITTGADQRPERERSLVEARLAEIRPKLETAARRELAYLRAVSKLPTGYPEAADIVD
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EAIMRVIASDHGVVDAGELKIAALRELFAVIDAEIAAQQISMSAIPLDSEVPQDAEDEAE
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
AMVEEEFYEFYQPDDHVTLADVLPVELSQTKVALDEMHVAGVVAALRDLPNLWRRVFVLR
HHHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQDLFAPKQVSEVVDRALDEIEDIFEKVSAFLDARLAEWGADSWEEIFRSKGCRCCRQAP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHCC
MRTGV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA