Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485840

Identifier: 103485840

GI number: 103485840

Start: 349119

End: 351053

Strand: Direct

Name: 103485840

Synonym: Sala_0345

Alternate gene names: NA

Gene position: 349119-351053 (Clockwise)

Preceding gene: 103485839

Following gene: 103485841

Centisome position: 10.44

GC content: 67.44

Gene sequence:

>1935_bases
ATGAGCTTCATCCTGCGCCGCATCGCGACGACCAAGACGGGCAAGCAGATCGTCCGCGATCAGCCGCTGCCGGGCGACAC
GATCACGCTGGGTCGCGACAGCGCGAACGGGATTCACGTCGCCGATCTGGCGGTAAATCCGCACCATGCGACGATCGCCA
GCAGCGATGGGCGCACGGTGCGGGTGACGGCGCAGGAGGGGCTGGGGTTCGACCTCAACGGCCGCACCGAAACCGTCGCC
GACATCGACAGCGCGGCGGGGGGTGAGCTTCGCTTCGGCGGCCACCGGCTGACGATCGCGCGCGAGGACGGCAGGATCAT
CCTCCTCGTCGAGCGCATCGACGAATTGTCGCAATCGTCGAAGGATGTCGACGAGGTAAAGGCCTTTTCGCTCGCGGGCG
TGATGCCGGGCAAGCGGGTCGGGGCGTGGACCTTTGGCCTGCTGATGCTGCTGGCGTTCCTCGTGGGGCCGATCTGGGCA
TGGCACAGCTATCGCCAGGTCGACGAGCGGCCCGACGGCTTCCACGCCGACCGTACCTGGCTGTCGGGTCCGCTGTCGAG
CGCGCACGCCAATCTGACCAAGGATTGCCAGTCGTGCCACGTCGAGCCGTTCGTCGCGGTGACCGACAGTGCGTGCGTGA
ACTGTCACACGGGTGAGCACAAGGCGATGAGCATGGCGCACGCCGGTGCGCCGACCGCGATGCTGCTCGCGGCGCGCGCC
CCGCCGGGCGGGTTCGACAAGTTCCTCGCCAATGTCGGCGAGGCATTCAACCGGCCGCAGGGACGCTGCGTCGATTGCCA
TACCGAGCATGAGGGCGCCGGGCCGATGGCGGCGACGCCGCAGCAATTCTGCGCCGATTGCCACGACGGGATGCAGGGCC
GGCTCAAAAGTGCGGGGCATCCGACGATGCTGGCCGATGCCAGCGATTTCGGCACGGGCCACCCCGAGTTCCGCCCACTC
GTCCGCGCCGTGCCGGGCGGTAAACTGGAGCGTATGATGCTGGCGAAGGGCGTCGTCGACGACAACGGCCTGAAGTTCCC
GCACGACCTGCACCTGCGGGCGAATGGCGGGGTCGCGCGTATGGCGGCGAGTTTTCGGGGCCGTCATGATTTCGGGCGGA
AGCTGGAATGCGAGAATTGCCACCGGGTCGAGGCCGATGGTGTGCGCGTCAAGCCCGTCGAGATGGAGCGCGACTGCGCG
ATGTGTCACAGCCTGGCGTTCGAGACCGTCGGCGGGGTGACGCGGACGCTGCGCCACGGCGAGCCGACGCAGGTCATCGC
CGACCTGACCGCCTATTACCGCTCGACCCCGCCGTCGCGACCGCTTCAACTGGGCGGAATGCAGCGGCGGCGGCCGGGAG
CCTATGCCGAGGGGCAGGTTTACAACATCTATTTCAACGAGGTGGCGGTGCGGCCGGCCCGCGCGCAGGATGCCGTGCGC
GCAATCTTTTCCAAGGGCGGCGCCTGTTACGACTGCCACACCATCTTCGCCCCACGGGCGGGCAGCAGCTGGCGCGTCGC
GGCGGTGAACCAGACGCAGCGTTACCTGCAAAAGGGCTGGTTCGACCATGACGCGCACAAGGAAACCGCGTGCGCCGATT
GCCATACCGCAGCGCCCGCGTCGAAAGCGTCGACCGACCTGCTCGTGCCGGGCCTTCGCCAGTGCCGCGACTGTCATGTC
GGCGAAGGTGGGGCGCGGCTGGTGAAGGTCGAAACCGCGACCGAATCGCCCTGCGCCATGTGCCATGAATATCATTCGGA
CGGCGGCAAACCGTGGGCGCCGAAGCGTCAGCAGAGAGTTAACAGCGTGGCAATCACAAATAAACGCGCCGGTGCCAGTG
TGAGTGTGACCGCGATCACAGGTGCCGCCGCGCGTGGTCTTTATCATGTGACGTGGCGCACACCGGCCTTGCACGGGGCA
AGGCGGGGCGGGTGA

Upstream 100 bases:

>100_bases
GAAATCTGGCTCTATGTGCATGTGCCGCTGACCTTTGCGCTGATCGCGGCGCTGTCGGCGCATATCGTCAGCGTCTTTTT
CTATTGGTGAGGCGGGGACG

Downstream 100 bases:

>100_bases
ACTATCGGGCCGGGACCAGCCGGTGACAGCAGGGGACGGATATGCTGATCGCCCAGATCACCGATATCCACATCGGGTTC
GATCCGGACAATCCGGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Forkhead-Associated Protein

Number of amino acids: Translated: 644; Mature: 643

Protein sequence:

>644_residues
MSFILRRIATTKTGKQIVRDQPLPGDTITLGRDSANGIHVADLAVNPHHATIASSDGRTVRVTAQEGLGFDLNGRTETVA
DIDSAAGGELRFGGHRLTIAREDGRIILLVERIDELSQSSKDVDEVKAFSLAGVMPGKRVGAWTFGLLMLLAFLVGPIWA
WHSYRQVDERPDGFHADRTWLSGPLSSAHANLTKDCQSCHVEPFVAVTDSACVNCHTGEHKAMSMAHAGAPTAMLLAARA
PPGGFDKFLANVGEAFNRPQGRCVDCHTEHEGAGPMAATPQQFCADCHDGMQGRLKSAGHPTMLADASDFGTGHPEFRPL
VRAVPGGKLERMMLAKGVVDDNGLKFPHDLHLRANGGVARMAASFRGRHDFGRKLECENCHRVEADGVRVKPVEMERDCA
MCHSLAFETVGGVTRTLRHGEPTQVIADLTAYYRSTPPSRPLQLGGMQRRRPGAYAEGQVYNIYFNEVAVRPARAQDAVR
AIFSKGGACYDCHTIFAPRAGSSWRVAAVNQTQRYLQKGWFDHDAHKETACADCHTAAPASKASTDLLVPGLRQCRDCHV
GEGGARLVKVETATESPCAMCHEYHSDGGKPWAPKRQQRVNSVAITNKRAGASVSVTAITGAAARGLYHVTWRTPALHGA
RRGG

Sequences:

>Translated_644_residues
MSFILRRIATTKTGKQIVRDQPLPGDTITLGRDSANGIHVADLAVNPHHATIASSDGRTVRVTAQEGLGFDLNGRTETVA
DIDSAAGGELRFGGHRLTIAREDGRIILLVERIDELSQSSKDVDEVKAFSLAGVMPGKRVGAWTFGLLMLLAFLVGPIWA
WHSYRQVDERPDGFHADRTWLSGPLSSAHANLTKDCQSCHVEPFVAVTDSACVNCHTGEHKAMSMAHAGAPTAMLLAARA
PPGGFDKFLANVGEAFNRPQGRCVDCHTEHEGAGPMAATPQQFCADCHDGMQGRLKSAGHPTMLADASDFGTGHPEFRPL
VRAVPGGKLERMMLAKGVVDDNGLKFPHDLHLRANGGVARMAASFRGRHDFGRKLECENCHRVEADGVRVKPVEMERDCA
MCHSLAFETVGGVTRTLRHGEPTQVIADLTAYYRSTPPSRPLQLGGMQRRRPGAYAEGQVYNIYFNEVAVRPARAQDAVR
AIFSKGGACYDCHTIFAPRAGSSWRVAAVNQTQRYLQKGWFDHDAHKETACADCHTAAPASKASTDLLVPGLRQCRDCHV
GEGGARLVKVETATESPCAMCHEYHSDGGKPWAPKRQQRVNSVAITNKRAGASVSVTAITGAAARGLYHVTWRTPALHGA
RRGG
>Mature_643_residues
SFILRRIATTKTGKQIVRDQPLPGDTITLGRDSANGIHVADLAVNPHHATIASSDGRTVRVTAQEGLGFDLNGRTETVAD
IDSAAGGELRFGGHRLTIAREDGRIILLVERIDELSQSSKDVDEVKAFSLAGVMPGKRVGAWTFGLLMLLAFLVGPIWAW
HSYRQVDERPDGFHADRTWLSGPLSSAHANLTKDCQSCHVEPFVAVTDSACVNCHTGEHKAMSMAHAGAPTAMLLAARAP
PGGFDKFLANVGEAFNRPQGRCVDCHTEHEGAGPMAATPQQFCADCHDGMQGRLKSAGHPTMLADASDFGTGHPEFRPLV
RAVPGGKLERMMLAKGVVDDNGLKFPHDLHLRANGGVARMAASFRGRHDFGRKLECENCHRVEADGVRVKPVEMERDCAM
CHSLAFETVGGVTRTLRHGEPTQVIADLTAYYRSTPPSRPLQLGGMQRRRPGAYAEGQVYNIYFNEVAVRPARAQDAVRA
IFSKGGACYDCHTIFAPRAGSSWRVAAVNQTQRYLQKGWFDHDAHKETACADCHTAAPASKASTDLLVPGLRQCRDCHVG
EGGARLVKVETATESPCAMCHEYHSDGGKPWAPKRQQRVNSVAITNKRAGASVSVTAITGAAARGLYHVTWRTPALHGAR
RGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69541; Mature: 69410

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFILRRIATTKTGKQIVRDQPLPGDTITLGRDSANGIHVADLAVNPHHATIASSDGRTV
CHHHHHHHHHCHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEEECCCCCEE
RVTAQEGLGFDLNGRTETVADIDSAAGGELRFGGHRLTIAREDGRIILLVERIDELSQSS
EEEECCCCCCCCCCCCCHHHHHHCCCCCCEEECCEEEEEEECCCCEEEEHHHHHHHHHCC
KDVDEVKAFSLAGVMPGKRVGAWTFGLLMLLAFLVGPIWAWHSYRQVDERPDGFHADRTW
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
LSGPLSSAHANLTKDCQSCHVEPFVAVTDSACVNCHTGEHKAMSMAHAGAPTAMLLAARA
HCCCCCHHHCHHHHHHHHCCCCCEEEECCCCEEECCCCCHHHHHHHHCCCCCEEEEEECC
PPGGFDKFLANVGEAFNRPQGRCVDCHTEHEGAGPMAATPQQFCADCHDGMQGRLKSAGH
CCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCC
PTMLADASDFGTGHPEFRPLVRAVPGGKLERMMLAKGVVDDNGLKFPHDLHLRANGGVAR
CEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHH
MAASFRGRHDFGRKLECENCHRVEADGVRVKPVEMERDCAMCHSLAFETVGGVTRTLRHG
HHHHHCCCCCCCCCCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
EPTQVIADLTAYYRSTPPSRPLQLGGMQRRRPGAYAEGQVYNIYFNEVAVRPARAQDAVR
CHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCEEEEEEECCEEECCHHHHHHHH
AIFSKGGACYDCHTIFAPRAGSSWRVAAVNQTQRYLQKGWFDHDAHKETACADCHTAAPA
HHHHCCCCEEEEEEEECCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCC
SKASTDLLVPGLRQCRDCHVGEGGARLVKVETATESPCAMCHEYHSDGGKPWAPKRQQRV
CCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHH
NSVAITNKRAGASVSVTAITGAAARGLYHVTWRTPALHGARRGG
HHEEEECCCCCCEEEEEEECCHHHCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SFILRRIATTKTGKQIVRDQPLPGDTITLGRDSANGIHVADLAVNPHHATIASSDGRTV
HHHHHHHHHCHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEEECCCCCEE
RVTAQEGLGFDLNGRTETVADIDSAAGGELRFGGHRLTIAREDGRIILLVERIDELSQSS
EEEECCCCCCCCCCCCCHHHHHHCCCCCCEEECCEEEEEEECCCCEEEEHHHHHHHHHCC
KDVDEVKAFSLAGVMPGKRVGAWTFGLLMLLAFLVGPIWAWHSYRQVDERPDGFHADRTW
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
LSGPLSSAHANLTKDCQSCHVEPFVAVTDSACVNCHTGEHKAMSMAHAGAPTAMLLAARA
HCCCCCHHHCHHHHHHHHCCCCCEEEECCCCEEECCCCCHHHHHHHHCCCCCEEEEEECC
PPGGFDKFLANVGEAFNRPQGRCVDCHTEHEGAGPMAATPQQFCADCHDGMQGRLKSAGH
CCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCC
PTMLADASDFGTGHPEFRPLVRAVPGGKLERMMLAKGVVDDNGLKFPHDLHLRANGGVAR
CEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHH
MAASFRGRHDFGRKLECENCHRVEADGVRVKPVEMERDCAMCHSLAFETVGGVTRTLRHG
HHHHHCCCCCCCCCCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
EPTQVIADLTAYYRSTPPSRPLQLGGMQRRRPGAYAEGQVYNIYFNEVAVRPARAQDAVR
CHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCEEEEEEECCEEECCHHHHHHHH
AIFSKGGACYDCHTIFAPRAGSSWRVAAVNQTQRYLQKGWFDHDAHKETACADCHTAAPA
HHHHCCCCEEEEEEEECCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCC
SKASTDLLVPGLRQCRDCHVGEGGARLVKVETATESPCAMCHEYHSDGGKPWAPKRQQRV
CCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHH
NSVAITNKRAGASVSVTAITGAAARGLYHVTWRTPALHGARRGG
HHEEEECCCCCCEEEEEEECCHHHCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA