Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485801

Identifier: 103485801

GI number: 103485801

Start: 309459

End: 310688

Strand: Direct

Name: 103485801

Synonym: Sala_0306

Alternate gene names: NA

Gene position: 309459-310688 (Clockwise)

Preceding gene: 103485800

Following gene: 103485802

Centisome position: 9.25

GC content: 67.07

Gene sequence:

>1230_bases
ATGGCCCGCACCCGACTGATCGCCGCGATGATCCTGACCTATGTTGGCTTTGCGATGCTGCTCAACAGCGTCGGGACGGT
GATCCTCCAGTCGATTTCCAGCTTTGGCGTCACCAAGCCGCAGGCGAGCACGCTGGAGGGGTTCAAGGACATCACGATCG
CGCTCGTGTCATTCGCGACGGCCAGCTATCTCGCGCGCATCGGCCTGCGCAAGGCGCTGATCGGCGCGCTGCTGCTTGCG
ATCGCGGCCTGTCTCGTGATGCCGATGCTCGGCAGCTTCGGGGCGGCGCAGCTGCATTTCGCGATGGTCGGCGCTGCCTT
TGCCGTCGCCAAGGTCGCGGTCTATTCGATGATCGGCTTCGTCACCGCCGGACCGCGCCAGCACGCCAGCCTGACCAGCC
TGATCGAGGGCATGTTCATGCTCGGCGTGCTCGCCTCCTACTGGGTGTTCAGCGCCTTCATCGATCCCACCGGGCTGCGC
TGGCTGAATGCCTATTGGGTGCTCGCGGGCATCGTTGCGCTTGCGCTTGCGTTGCTGCTCTCGTCGCGCGTCGACGAGGC
GCCGGCGGGCGAAGAGCCAGCGGTACCCGAGGCGGCGCCCTTCCGCGCGATGCTGCGCCTCGCGGCGCTGCCGCTGGTGC
TCGTGTTCGTGCTCTGCGCTTTCGTTTTCGTCGTCATCGAACAGGGGATCGGCACCTGGCTGCCGACCTTCAACAACGAG
GTGCTGCACCTGCCGGCGCAGATGAGTGTGCAGGCGGCCAGCCTGTTCGCGGCGTGTATCGCGCTCGGCCGTTTTGGCGC
GGGGGCGGTGATGGCGCGGTTCGACTGGTATCCGGTGCTGAACGCCTGCCTGATCCTGCTCGCGGCGCTCATCATCCTCG
TCCTGCCGCTCGCCGACGGGCTGTCGCCGCGGCCGATCGCAGGGTGGGGCGATGCGCCGGTGGCGGCCTTCCTGTTTCCG
CTCATCGGCTTTGCGCTCGCGCCCATCTATCCGACGATCATCTCGGTGATGCTGAGCGCGATGCCGGGCCGCCAGCACCC
GCCGCTGATGGGGCTGGTCGTCGTCTTCTCGGCGCTCGGCGGGACGACGGGGTCGGTGATCACCGGCCAGCTCTTCGCGC
ATCTCGACGGGCGCACCGCCTTTACGCTGATGCTCGTGCCGACCGCGATTCTCGGCATCGGGCTGTTTCTGTTGCGGCGG
CAGATCGCGGTAAAAGACACTGCGAGCTAG

Upstream 100 bases:

>100_bases
GCGCAACCGACAAAATCCTCCCCATCGCAAGTCGATGGGGAGGATCAGGCGGCCCTACCGCACCCGATACATTCGCCTCC
GTCTCGCCTAAGGACATGCC

Downstream 100 bases:

>100_bases
GGTCAGGACCCATTAATTCCCCGTTCGAGGTTTGAAGCGATTTTGCTCAGGGCGAGGAGGAAAGGCGCAGGAATATGGAC
ATATTTCAAGACTTTTCGAC

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Transporter; Transporter MFS Superfamily; Facilitator Superfamily Permease

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MARTRLIAAMILTYVGFAMLLNSVGTVILQSISSFGVTKPQASTLEGFKDITIALVSFATASYLARIGLRKALIGALLLA
IAACLVMPMLGSFGAAQLHFAMVGAAFAVAKVAVYSMIGFVTAGPRQHASLTSLIEGMFMLGVLASYWVFSAFIDPTGLR
WLNAYWVLAGIVALALALLLSSRVDEAPAGEEPAVPEAAPFRAMLRLAALPLVLVFVLCAFVFVVIEQGIGTWLPTFNNE
VLHLPAQMSVQAASLFAACIALGRFGAGAVMARFDWYPVLNACLILLAALIILVLPLADGLSPRPIAGWGDAPVAAFLFP
LIGFALAPIYPTIISVMLSAMPGRQHPPLMGLVVVFSALGGTTGSVITGQLFAHLDGRTAFTLMLVPTAILGIGLFLLRR
QIAVKDTAS

Sequences:

>Translated_409_residues
MARTRLIAAMILTYVGFAMLLNSVGTVILQSISSFGVTKPQASTLEGFKDITIALVSFATASYLARIGLRKALIGALLLA
IAACLVMPMLGSFGAAQLHFAMVGAAFAVAKVAVYSMIGFVTAGPRQHASLTSLIEGMFMLGVLASYWVFSAFIDPTGLR
WLNAYWVLAGIVALALALLLSSRVDEAPAGEEPAVPEAAPFRAMLRLAALPLVLVFVLCAFVFVVIEQGIGTWLPTFNNE
VLHLPAQMSVQAASLFAACIALGRFGAGAVMARFDWYPVLNACLILLAALIILVLPLADGLSPRPIAGWGDAPVAAFLFP
LIGFALAPIYPTIISVMLSAMPGRQHPPLMGLVVVFSALGGTTGSVITGQLFAHLDGRTAFTLMLVPTAILGIGLFLLRR
QIAVKDTAS
>Mature_408_residues
ARTRLIAAMILTYVGFAMLLNSVGTVILQSISSFGVTKPQASTLEGFKDITIALVSFATASYLARIGLRKALIGALLLAI
AACLVMPMLGSFGAAQLHFAMVGAAFAVAKVAVYSMIGFVTAGPRQHASLTSLIEGMFMLGVLASYWVFSAFIDPTGLRW
LNAYWVLAGIVALALALLLSSRVDEAPAGEEPAVPEAAPFRAMLRLAALPLVLVFVLCAFVFVVIEQGIGTWLPTFNNEV
LHLPAQMSVQAASLFAACIALGRFGAGAVMARFDWYPVLNACLILLAALIILVLPLADGLSPRPIAGWGDAPVAAFLFPL
IGFALAPIYPTIISVMLSAMPGRQHPPLMGLVVVFSALGGTTGSVITGQLFAHLDGRTAFTLMLVPTAILGIGLFLLRRQ
IAVKDTAS

Specific function: Unknown

COG id: COG0738

COG function: function code G; Fucose permease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43003; Mature: 42872

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTRLIAAMILTYVGFAMLLNSVGTVILQSISSFGVTKPQASTLEGFKDITIALVSFAT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ASYLARIGLRKALIGALLLAIAACLVMPMLGSFGAAQLHFAMVGAAFAVAKVAVYSMIGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VTAGPRQHASLTSLIEGMFMLGVLASYWVFSAFIDPTGLRWLNAYWVLAGIVALALALLL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SSRVDEAPAGEEPAVPEAAPFRAMLRLAALPLVLVFVLCAFVFVVIEQGIGTWLPTFNNE
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VLHLPAQMSVQAASLFAACIALGRFGAGAVMARFDWYPVLNACLILLAALIILVLPLADG
EEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LSPRPIAGWGDAPVAAFLFPLIGFALAPIYPTIISVMLSAMPGRQHPPLMGLVVVFSALG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
GTTGSVITGQLFAHLDGRTAFTLMLVPTAILGIGLFLLRRQIAVKDTAS
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARTRLIAAMILTYVGFAMLLNSVGTVILQSISSFGVTKPQASTLEGFKDITIALVSFAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ASYLARIGLRKALIGALLLAIAACLVMPMLGSFGAAQLHFAMVGAAFAVAKVAVYSMIGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VTAGPRQHASLTSLIEGMFMLGVLASYWVFSAFIDPTGLRWLNAYWVLAGIVALALALLL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SSRVDEAPAGEEPAVPEAAPFRAMLRLAALPLVLVFVLCAFVFVVIEQGIGTWLPTFNNE
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VLHLPAQMSVQAASLFAACIALGRFGAGAVMARFDWYPVLNACLILLAALIILVLPLADG
EEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LSPRPIAGWGDAPVAAFLFPLIGFALAPIYPTIISVMLSAMPGRQHPPLMGLVVVFSALG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
GTTGSVITGQLFAHLDGRTAFTLMLVPTAILGIGLFLLRRQIAVKDTAS
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA