Definition | Agrobacterium vitis S4 plasmid pAtS4b, complete sequence. |
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Accession | NC_011991 |
Length | 130,435 |
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The map label for this gene is 222109185
Identifier: 222109185
GI number: 222109185
Start: 73516
End: 73695
Strand: Reverse
Name: 222109185
Synonym: Avi_9603
Alternate gene names: NA
Gene position: 73695-73516 (Counterclockwise)
Preceding gene: 222109187
Following gene: 222109184
Centisome position: 56.5
GC content: 50.0
Gene sequence:
>180_bases GTGGCCGACGAGGCTTTTTGCGATTTCTTTCTGCACTGGTTTCGATGGCGGGTCCCCAATTCCGCGAGGATTGCGGATAA TCTGTTGAAGGTTTTTCTGGTGCTCACAACCGCCTCCATCACCATCGATCCGATATTTGCCGCGAATATCCTACAAAGCT ATATGCGGGTGGCTAATTAA
Upstream 100 bases:
>100_bases CCCACCGTAAGATCTTGGAGACGAAAGCTATCGATATCGTCGCGCTCCAATATCTGCGCCAAGCGATAGAGCGGTCATTA ACCATCCGGTCAGGGTCGCA
Downstream 100 bases:
>100_bases TATTTACCTTCTTGCAACTGAATGTTCAACAGCTGCCGTGGTCGCTCAACCAACCAAGGGAATATTTTCGTATAGCCAAG AGTGGGTCACAATGAGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 59; Mature: 58
Protein sequence:
>59_residues MADEAFCDFFLHWFRWRVPNSARIADNLLKVFLVLTTASITIDPIFAANILQSYMRVAN
Sequences:
>Translated_59_residues MADEAFCDFFLHWFRWRVPNSARIADNLLKVFLVLTTASITIDPIFAANILQSYMRVAN >Mature_58_residues ADEAFCDFFLHWFRWRVPNSARIADNLLKVFLVLTTASITIDPIFAANILQSYMRVAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6835; Mature: 6704
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADEAFCDFFLHWFRWRVPNSARIADNLLKVFLVLTTASITIDPIFAANILQSYMRVAN CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ADEAFCDFFLHWFRWRVPNSARIADNLLKVFLVLTTASITIDPIFAANILQSYMRVAN CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA