Definition Agrobacterium vitis S4 plasmid pAtS4b, complete sequence.
Accession NC_011991
Length 130,435

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The map label for this gene is 222109155

Identifier: 222109155

GI number: 222109155

Start: 46023

End: 46520

Strand: Reverse

Name: 222109155

Synonym: Avi_9549

Alternate gene names: NA

Gene position: 46520-46023 (Counterclockwise)

Preceding gene: 222109156

Following gene: 222109152

Centisome position: 35.67

GC content: 57.63

Gene sequence:

>498_bases
ATGGAGTATCTTGGTCCGCTTTATCGCGCGCTCAACCCCGTATACGCGCGTGAACCACTATCCGGTCGTGGTGCCGAACT
CTATGGCGGCCGGTTCAACCCAAAAGGAGTTCCGGCACTTTACACATCCCTGTCGATAATCACGGCATTGCGAGAAGCCA
ACCAGGCCGGCAGTTTTCAACCGACGACACTGGTGTCCTATGACGCGGAAATCAACCACGTGTTTGATACGAGAGATGAG
ACCACGCTTGCCAGGAAAGGCATGGATAGGGCAGCGCTCAGCGACGACAGCTGGCGCGACCAGATGAAGGCGACCGGTGA
AGCGCGAACGCAGGCCTTCGCCCGCCTGTTGATAGCCGAGGGCTATAGTGGGCTGCTGGTGCGGAGCTTCGCCCAGGGCG
TCGGAGAAAAAGATCTCAATCTCGTACTGTGGAAGTGGGGTGAGAAGACCCCCTCCCGCCTGACATTGGTCGATGACGAA
AACAGGCTATCTCGATAG

Upstream 100 bases:

>100_bases
TCTCCGGGCAAACGGCTATGCAACTCGTTCGCACCGGCCGGGTCGAGGATGTCCTCGACTTTATCGATGCGGTCGACGCT
GGCGTCCATGCCTGACCGAG

Downstream 100 bases:

>100_bases
CGGCCCGCTCAGCGGTCGCAACCCGCCGACCCCGGTTCGGATGAACAGGTCCGACGCGATTGTGGTCGTTTCAAACCATG
TCTAACCCCGTCGAAGTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: RES Domain Protein; RES Domain Superfamily

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MEYLGPLYRALNPVYAREPLSGRGAELYGGRFNPKGVPALYTSLSIITALREANQAGSFQPTTLVSYDAEINHVFDTRDE
TTLARKGMDRAALSDDSWRDQMKATGEARTQAFARLLIAEGYSGLLVRSFAQGVGEKDLNLVLWKWGEKTPSRLTLVDDE
NRLSR

Sequences:

>Translated_165_residues
MEYLGPLYRALNPVYAREPLSGRGAELYGGRFNPKGVPALYTSLSIITALREANQAGSFQPTTLVSYDAEINHVFDTRDE
TTLARKGMDRAALSDDSWRDQMKATGEARTQAFARLLIAEGYSGLLVRSFAQGVGEKDLNLVLWKWGEKTPSRLTLVDDE
NRLSR
>Mature_165_residues
MEYLGPLYRALNPVYAREPLSGRGAELYGGRFNPKGVPALYTSLSIITALREANQAGSFQPTTLVSYDAEINHVFDTRDE
TTLARKGMDRAALSDDSWRDQMKATGEARTQAFARLLIAEGYSGLLVRSFAQGVGEKDLNLVLWKWGEKTPSRLTLVDDE
NRLSR

Specific function: Unknown

COG id: COG5654

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18373; Mature: 18373

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYLGPLYRALNPVYAREPLSGRGAELYGGRFNPKGVPALYTSLSIITALREANQAGSFQ
CCHHHHHHHHCCCHHHCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PTTLVSYDAEINHVFDTRDETTLARKGMDRAALSDDSWRDQMKATGEARTQAFARLLIAE
CCEEEEECCCCCHHCCCCCHHHHHHCCCCHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHC
GYSGLLVRSFAQGVGEKDLNLVLWKWGEKTPSRLTLVDDENRLSR
CCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MEYLGPLYRALNPVYAREPLSGRGAELYGGRFNPKGVPALYTSLSIITALREANQAGSFQ
CCHHHHHHHHCCCHHHCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PTTLVSYDAEINHVFDTRDETTLARKGMDRAALSDDSWRDQMKATGEARTQAFARLLIAE
CCEEEEECCCCCHHCCCCCHHHHHHCCCCHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHC
GYSGLLVRSFAQGVGEKDLNLVLWKWGEKTPSRLTLVDDENRLSR
CCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA