Click here to switch to the map view.

The map label for this gene is 222109152

Identifier: 222109152

GI number: 222109152

Start: 44261

End: 44698

Strand: Reverse

Name: 222109152

Synonym: Avi_9542

Alternate gene names: NA

Gene position: 44698-44261 (Counterclockwise)

Preceding gene: 222109155

Following gene: 222109146

Centisome position: 34.27

GC content: 53.88

Gene sequence:

>438_bases
GTGATGATGGCGGTTGCCTCTGACACGACGATCGATCAAAGCAGCGGAAGCAGAATGCAAGTTTTTACGGAGTATAACGG
CAAACGGTTCGTGACGAACATGGATTTCCTCCTGGCGGATGAGGATGATTACGCCACCTACCTTCTCAATGCGACGCGGC
TTAATCAAGAGCTCGGAAAGGATCCGTTCTTTTGGGCAAGTGATCGCACAGCTGTTCTGGCGCAGACAGACTTCAAACCC
GGCAAATACCATTGCTGGGTTACGAGGCTCGAAGCGCGCCAGGAAATAGCAATCCCGATCCTGACGCAGACTTCAGAGGG
CGAAGTTACGGTGCTTTCCGGCCGCCACCGTATCATGGCGATGATGGACAACGGTTTTGAACAAATTCCGGTGCGGGCGA
AGGTCGCGCTTCGAGAAAAGTTGGCCCCTCTCGCTTGA

Upstream 100 bases:

>100_bases
TCCGGACCATCGAACGCAGCGCAACGATGGATGAGTGGCCATGGTGGTCGTTGCTCTTTACCAATGATAGGCCAAGCCGC
AGAGTTCAGTATATCGATTC

Downstream 100 bases:

>100_bases
AGAAGCGTATTGAAAGAATGGCGAGTTCGCCAAGCTTCTTCCCTCTGTGCGCAGGTTTCGCGGGCAAGCGGCTATCCGCC
AATTAGGACAGCCGTGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MMMAVASDTTIDQSSGSRMQVFTEYNGKRFVTNMDFLLADEDDYATYLLNATRLNQELGKDPFFWASDRTAVLAQTDFKP
GKYHCWVTRLEARQEIAIPILTQTSEGEVTVLSGRHRIMAMMDNGFEQIPVRAKVALREKLAPLA

Sequences:

>Translated_145_residues
MMMAVASDTTIDQSSGSRMQVFTEYNGKRFVTNMDFLLADEDDYATYLLNATRLNQELGKDPFFWASDRTAVLAQTDFKP
GKYHCWVTRLEARQEIAIPILTQTSEGEVTVLSGRHRIMAMMDNGFEQIPVRAKVALREKLAPLA
>Mature_145_residues
MMMAVASDTTIDQSSGSRMQVFTEYNGKRFVTNMDFLLADEDDYATYLLNATRLNQELGKDPFFWASDRTAVLAQTDFKP
GKYHCWVTRLEARQEIAIPILTQTSEGEVTVLSGRHRIMAMMDNGFEQIPVRAKVALREKLAPLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16428; Mature: 16428

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMAVASDTTIDQSSGSRMQVFTEYNGKRFVTNMDFLLADEDDYATYLLNATRLNQELGK
CEEEECCCCEEECCCCCEEEEEEECCCEEEEEECEEEEECCCCCEEEEEEHHHHHHHHCC
DPFFWASDRTAVLAQTDFKPGKYHCWVTRLEARQEIAIPILTQTSEGEVTVLSGRHRIMA
CCCEEECCCEEEEEECCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCEEEEECCCEEEE
MMDNGFEQIPVRAKVALREKLAPLA
EECCCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MMMAVASDTTIDQSSGSRMQVFTEYNGKRFVTNMDFLLADEDDYATYLLNATRLNQELGK
CEEEECCCCEEECCCCCEEEEEEECCCEEEEEECEEEEECCCCCEEEEEEHHHHHHHHCC
DPFFWASDRTAVLAQTDFKPGKYHCWVTRLEARQEIAIPILTQTSEGEVTVLSGRHRIMA
CCCEEECCCEEEEEECCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCEEEEECCCEEEE
MMDNGFEQIPVRAKVALREKLAPLA
EECCCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA