Click here to switch to the map view.

The map label for this gene is 158340598

Identifier: 158340598

GI number: 158340598

Start: 120290

End: 121258

Strand: Direct

Name: 158340598

Synonym: AM1_C0146

Alternate gene names: NA

Gene position: 120290-121258 (Clockwise)

Preceding gene: 158340595

Following gene: 158340599

Centisome position: 44.04

GC content: 44.99

Gene sequence:

>969_bases
ATGGACGTTAGCCTAATCATATCCAATATTCTTAATCCACCTGTGCTGTTCTTTTTCCTGGGTATGATGGCTGTTTTCGT
TCAATCTGACTTAGAAATACCAGCCCCAATTCCGAAGTTATTCTCACTTTATCTGCTCTTTGCAATTGGCTTTAAGGGGG
GCGTTGAATTAGTTAAGAGTGGGATTACCCAGGATGTAATGCTCACCTTAGCCGCTTCAGTGCTAATGGCCTGTTTTGTC
CCGCTCTATACGTTCTTTATTCTCAAAATTAAGCTGGGGAATTATGATGCCGCTGCGATCGCAGCCACGTATGGTTCCAT
TAGTGCCGTGACATTCATTACCGCTAGTGCTTTCTTAACCGATTTAGGGATTGATTTTGATGGCTTTATGGTAGCCGCCC
TAGCCTTAATGGAATCTCCTGCAATTATCGTTGGCTTGATTCTCGTTAACCTGTTTGCCGCCAACCGGGAACAAGACTTG
GAATGGTCGGAAGTTTTAAAGGAAGCGTTTCTCAACAGTTCAGTGTTTCTTCTCGTCGGTAGTTTGCTGATCGGCGTCTT
AACGGGAGAGCATGGTTGGGAAGTCCTAGAACCTTTCACCCAAGGATTATTCTATGGCGTGCTCACCTTTTTCTTACTCG
ACATGGGACTAGTGGCCGCTCGAAGAATTAAAGACTTGCAAAAAACCGGAGTTTTCTTAGTTGGGTTTGCCATACTGATA
CCAATCGTAAATGCTGGTATCGGGTTAGGAATCGCCAAACTGATTGGCATGTCCGTTGGCAATGCGCTCTTATACTCAGT
ACTTTGTGCAAGTGCTTCATACATTGCCGTTCCTGCCGCAATGCGCATGACTGTTCCTGAAGCCAATCCGAGCCTCTATG
TTTCAACGGCGTTGGCTGTGACCTTTCCGTTCAATATTATTGTCGGAATCCCTCTATACCTTGCTGGAATCGAGTTTTTA
TGGAGTTAA

Upstream 100 bases:

>100_bases
TATTTGAATTAGCCTACTATCAATAATAAATAAGGAATTATTGAAGAAGATGTCTCCTGATATTTTCGTGTAATTTTTTA
TTTCGTTGGAAGGTCTTTTT

Downstream 100 bases:

>100_bases
GGGCATGCATCCTGTTAAGAAAATTGAAATTATTGCCAATTCCTTTGAACTCGGTAAAATTTTAGACGCTTTAGATCAAT
CGGGGGTTCATGGGCATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Sodium-Dependent Bicarbonate Transporter; Sodium Bicarbonate Cotransporter; Conserved Domain Protein; Permease-Like Protein; SBT Type Permease Sodium-Bicarbonate; Membrane Permease; Domain Transmembrane Protein; Sodium Dependent Bicarbonate Transporter

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MDVSLIISNILNPPVLFFFLGMMAVFVQSDLEIPAPIPKLFSLYLLFAIGFKGGVELVKSGITQDVMLTLAASVLMACFV
PLYTFFILKIKLGNYDAAAIAATYGSISAVTFITASAFLTDLGIDFDGFMVAALALMESPAIIVGLILVNLFAANREQDL
EWSEVLKEAFLNSSVFLLVGSLLIGVLTGEHGWEVLEPFTQGLFYGVLTFFLLDMGLVAARRIKDLQKTGVFLVGFAILI
PIVNAGIGLGIAKLIGMSVGNALLYSVLCASASYIAVPAAMRMTVPEANPSLYVSTALAVTFPFNIIVGIPLYLAGIEFL
WS

Sequences:

>Translated_322_residues
MDVSLIISNILNPPVLFFFLGMMAVFVQSDLEIPAPIPKLFSLYLLFAIGFKGGVELVKSGITQDVMLTLAASVLMACFV
PLYTFFILKIKLGNYDAAAIAATYGSISAVTFITASAFLTDLGIDFDGFMVAALALMESPAIIVGLILVNLFAANREQDL
EWSEVLKEAFLNSSVFLLVGSLLIGVLTGEHGWEVLEPFTQGLFYGVLTFFLLDMGLVAARRIKDLQKTGVFLVGFAILI
PIVNAGIGLGIAKLIGMSVGNALLYSVLCASASYIAVPAAMRMTVPEANPSLYVSTALAVTFPFNIIVGIPLYLAGIEFL
WS
>Mature_322_residues
MDVSLIISNILNPPVLFFFLGMMAVFVQSDLEIPAPIPKLFSLYLLFAIGFKGGVELVKSGITQDVMLTLAASVLMACFV
PLYTFFILKIKLGNYDAAAIAATYGSISAVTFITASAFLTDLGIDFDGFMVAALALMESPAIIVGLILVNLFAANREQDL
EWSEVLKEAFLNSSVFLLVGSLLIGVLTGEHGWEVLEPFTQGLFYGVLTFFLLDMGLVAARRIKDLQKTGVFLVGFAILI
PIVNAGIGLGIAKLIGMSVGNALLYSVLCASASYIAVPAAMRMTVPEANPSLYVSTALAVTFPFNIIVGIPLYLAGIEFL
WS

Specific function: Unknown

COG id: COG3329

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34479; Mature: 34479

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVSLIISNILNPPVLFFFLGMMAVFVQSDLEIPAPIPKLFSLYLLFAIGFKGGVELVKS
CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
GITQDVMLTLAASVLMACFVPLYTFFILKIKLGNYDAAAIAATYGSISAVTFITASAFLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCHHHHHHHHHHHHHH
DLGIDFDGFMVAALALMESPAIIVGLILVNLFAANREQDLEWSEVLKEAFLNSSVFLLVG
HHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHH
SLLIGVLTGEHGWEVLEPFTQGLFYGVLTFFLLDMGLVAARRIKDLQKTGVFLVGFAILI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
PIVNAGIGLGIAKLIGMSVGNALLYSVLCASASYIAVPAAMRMTVPEANPSLYVSTALAV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCEEEEHHHHH
TFPFNIIVGIPLYLAGIEFLWS
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDVSLIISNILNPPVLFFFLGMMAVFVQSDLEIPAPIPKLFSLYLLFAIGFKGGVELVKS
CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
GITQDVMLTLAASVLMACFVPLYTFFILKIKLGNYDAAAIAATYGSISAVTFITASAFLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCHHHHHHHHHHHHHH
DLGIDFDGFMVAALALMESPAIIVGLILVNLFAANREQDLEWSEVLKEAFLNSSVFLLVG
HHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHH
SLLIGVLTGEHGWEVLEPFTQGLFYGVLTFFLLDMGLVAARRIKDLQKTGVFLVGFAILI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
PIVNAGIGLGIAKLIGMSVGNALLYSVLCASASYIAVPAAMRMTVPEANPSLYVSTALAV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCEEEEHHHHH
TFPFNIIVGIPLYLAGIEFLWS
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA